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Developer Program Member


@dib-lab @DataSounds @Lasanha

Pinned repositories

  1. dib-lab/sourmash

    Compute and compare MinHash signatures for DNA data sets.

    Standard ML 110 25

  2. sourmash-rust

    Rust implementation of sourmash core functionality

    Standard ML 4 1

  3. 2018-python-rust

    This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.


  4. dib-lab/khmer

    In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

    Python 533 274

  5. dib-lab/screed

    a simple read-only sequence database, designed for short reads

    Python 42 26

535 contributions in the last year

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Contribution activity

September 2018

Created a pull request in dib-lab/sourmash that received 7 comments

[WIP] Fix JSON loading

This fixes #544 Funny things ijson has different backends, and we always used the slower one (even with the faster ones available) the default one…

+66 −20 7 comments

Created an issue in bcgsc/ntHash that received 19 comments

ntHash is not matching the article description?

Hi! Last week I started implementing a Rust version of ntHash, and I can't make it match the output of ntHash (in this repo). I ended up following t…


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