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Developer Program Member

Organizations

@dib-lab @DataSounds @Lasanha

Pinned repositories

  1. dib-lab/sourmash

    Compute and compare MinHash signatures for DNA data sets.

    Standard ML 110 25

  2. sourmash-rust

    Rust implementation of sourmash core functionality

    Standard ML 4 1

  3. 2018-python-rust

    This work presents a way to write extensions in Rust and use them in Python, using sourmash as an example.

    10

  4. dib-lab/khmer

    In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more

    Python 533 274

  5. dib-lab/screed

    a simple read-only sequence database, designed for short reads

    Python 42 26

535 contributions in the last year

Sep Oct Nov Dec Jan Feb Mar Apr May Jun Jul Aug Sep Mon Wed Fri

Contribution activity

September 2018

Created a pull request in dib-lab/sourmash that received 7 comments

[WIP] Fix JSON loading

This fixes #544 Funny things ijson has different backends, and we always used the slower one (even with the faster ones available) the default one…

+66 −20 7 comments

Created an issue in bcgsc/ntHash that received 19 comments

ntHash is not matching the article description?

Hi! Last week I started implementing a Rust version of ntHash, and I can't make it match the output of ntHash (in this repo). I ended up following t…

19 comments

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