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Update install instructions (#500) #1219

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Update install instructions (#500)

Update install instructions (#500) #1219

Workflow file for this run

.github/workflows/tests.yml at a4987a6
name: Tests
on:
push:
branches:
- master
pull_request:
workflow_dispatch:
jobs:
ruff:
runs-on: ubuntu-22.04
container:
image: ghcr.io/lukasturcani/stk-test-environment
steps:
- name: Git checkout
uses: actions/checkout@v3
- name: Install stk
run: |
. /deps/venv/bin/activate
pip install --no-deps -e .
- name: Run ruff
run: |
. /deps/venv/bin/activate
ruff .
mypy:
runs-on: ubuntu-22.04
container:
image: ghcr.io/lukasturcani/stk-test-environment
steps:
- name: Git checkout
uses: actions/checkout@v3
- name: Install stk
run: |
. /deps/venv/bin/activate
pip install --no-deps -e .
- name: Run mypy
run: |
. /deps/venv/bin/activate
mypy src
black:
runs-on: ubuntu-22.04
container:
image: ghcr.io/lukasturcani/stk-test-environment
steps:
- name: Git checkout
uses: actions/checkout@v3
- name: Install stk
run: |
. /deps/venv/bin/activate
pip install --no-deps -e .
- name: Run black
run: |
. /deps/venv/bin/activate
black --check .
pytest-stable-linux:
runs-on: ubuntu-22.04
container:
image: ghcr.io/lukasturcani/stk-test-environment
services:
MongoDB:
image: mongo
steps:
- name: Git checkout
uses: actions/checkout@v3
- name: Install stk
run: |
. /deps/venv/bin/activate
pip install --no-deps -e .
- name: Run pytest
run: |
. /deps/venv/bin/activate
pytest --mongodb_uri='mongodb://MongoDB:27017/'
doctest:
runs-on: ubuntu-22.04
container:
image: ghcr.io/lukasturcani/stk-test-environment
services:
MongoDB:
image: mongo
steps:
- name: Git checkout
uses: actions/checkout@v3
- name: Install stk
run: |
. /deps/venv/bin/activate
pip install --no-deps -e .
- name: Run doctest
run: |
. /deps/venv/bin/activate
MONGODB_URI='mongodb://MongoDB:27017/' make -C docs doctest
basic-ea:
runs-on: ubuntu-22.04
container:
image: ghcr.io/lukasturcani/stk-test-environment
services:
MongoDB:
image: mongo
steps:
- name: Git checkout
uses: actions/checkout@v3
- name: Install stk
run: |
. /deps/venv/bin/activate
pip install --no-deps -e .
- name: Install dependencies
run: git clone https://github.com/lukasturcani/basic_ea
--depth 1
- name: Run the EA
run: >
. /deps/venv/bin/activate
python basic_ea/basic_ea.py
--mongodb_uri mongodb://MongoDB:27017
- name: Upload fitness plot
uses: actions/upload-artifact@v2
with:
name: basic-ea-fitness-plot
path: fitness_progress.png
- name: Upload rotatable bonds plot
uses: actions/upload-artifact@v2
with:
name: basic-ea-rotatable-bonds-plot
path: rotatable_bonds_progress.png
intermediate-ea:
runs-on: ubuntu-22.04
container:
image: ghcr.io/lukasturcani/stk-test-environment
services:
MongoDB:
image: mongo
steps:
- name: Git checkout
uses: actions/checkout@v3
- name: Install stk
run: |
. /deps/venv/bin/activate
pip install --no-deps -e .
- name: Install dependencies
run: git clone
https://github.com/lukasturcani/intermediate_ea
--depth 1
- name: Run the EA
run: >
. /deps/venv/bin/activate
python intermediate_ea/intermediate_ea.py
--mongodb_uri mongodb://MongoDB:27017
- name: Upload fitness plot
uses: actions/upload-artifact@v2
with:
name: intermediate-ea-fitness-plot
path: fitness_progress.png
- name: Upload rotatable bonds plot
uses: actions/upload-artifact@v2
with:
name: intermediate-ea-rotatable-bonds-plot
path: rotatable_bonds_progress.png