miccai2013

MICCAI 2013 code - Segmenting Multiple Overlapping Cervical Cells by Joint Level Set.

Paper Citation: [to be updated...]

==================== What's inside?

1. Dataset: four real EDF Pap smear images and synthetic test/training images in the folder './ims'.
2. Matlab code for the paper.

==================== Before running

1. This code requires third part libraries for GMM density estimation, Quick Shift and LBP. You need to download them separately.

   1.1 Statistical Pattern Recognition Toolbox: http://cmp.felk.cvut.cz/cmp/software/stprtool/

   1.2 VLFeat: http://www.vlfeat.org/

   1.3 LBP: http://www.cse.oulu.fi/CMV/Downloads/LBPMatlab (download the file "lbp.m" and "getmapping.m")

2. This code is compatible with Matlab R2012b or after.

==================== How to run?

1. Invoke script "Run.m". The argument in line 7 to invoke the function Runner_inOne(...) refers to:

   1.1 'EDF' - the real Pap smear images

   1.2 'Test' - the synthetic test images

   1.3 'Train' - the synthetic training images