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inst Adding Cs changeable date Oct 1, 2018
.Rbuildignore First attent to upload plum Jun 8, 2018
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DESCRIPTION
Introduction.R
NAMESPACE
Plum.Rproj
Plum_Tutorial.docx Spelling errors Oct 18, 2018
README
README.txt

README

This is a beta version of Plum (see: https://doi.org/10.1007/s13253-018-0328-7).

Plum is a R-package, with dependencies on Python 2.7, which uses a Bayesian approach to construct age-depth models for 210Pb data. At the moment Plum only works in Unix base OS (Linux-Mac) it depends on rPython package which is only available in these systems. 

Installing Plum

In order to install plum the following have to be install in your system,

R (>=3.0)
rPython (R package) 
Python 2.7
numpy (python package)
scipy (python package)
matplotlib (python package)


In the case of Mac OS, we recommend the installation of Anaconda (https://www.anaconda.com/download/). This will install python 2.7 and the necessary packages. 

For linux, 
Arch
# pacman -S python2 python2-numpy python2-scipy python2-matplotlib
Fedora 
# yum install python python-numpy python-scipy python-matplotlib
Ubuntu
# apt install python python-numpy python-scipy python-matplotli


To install rPython use install.packages("rPython", configure.vars= "RPYTHON_PYTHON_VERSION=2") this will let R know to use python 2.7.

To install Plum from R using devtools.

library(devtools)

install_github("maquinolopez/Plum")




For questions and contact me at: maquinolopez01@qub.ac.uk
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