Archiving and postprocessing
HarvestTools is a utility for creating and interfacing with Gingr files, which are efficient archives that the Harvest Suite uses to store reference-compressed multi-alignments, phylogenetic trees, filtered variants and annotations. Though designed for use with Parsnp and Gingr, HarvestTools can also be used for generic conversion between standard bioinformatics file formats.
Download (v1.2)
Documentation
harvest/quickstart harvest/components harvest/installation harvest/paramaters harvest/faq harvest/tutorial harvest/source harvest/license
Resources