Code and data for a manuscript entitled: Predicting Vaccine Effectiveness for hospitalization and symp-tomatic disease for Novel SARS-CoV-2 Variants Using Neutralizing Antibody Titers The code is OmicronCodeViruses.R This code uses 3 data files: fold_figure_all.csv Omicron_data_long2.csv validation.csv The code should run and reproduce the figures and analyses in the paper after filling in the setwd() line to wherever you have placed the data files.
This repository also has files from previous versions of this work that were posted as preprints, including a ms posted to medRxiv on 12/10/21, entitled: Estimates of reduced vaccine effectiveness against hospitalization, infection, transmission and symptomatic disease of a new SARS-CoV-2 variant, Omicron (B.1.1.529), using neutralizing antibody titers