These are slides notes for a workshop presented June 5th, 2023 at R Medicine 2023
Authors:
- Raymond R. Balise, Belén Hervera, Daniel Maya, Anna Calderon, & Tyler Bartholomew, Univ. of Miami Miller School of Medicine
- Stephan Kadauke, Children's Hospital of Philadelphia
- João Pedro Carmezim Correia, IGTP
- Will Beasley, Univ. of Oklahoma Health Sciences Center
The slides are saved as PDFs. You can browse the slides on GitHub using the links below.
| Topic | |
|---|---|
| Introduction | 01_introduction.pdf |
| IDEA (needle exchange) example and tidyREDCap | 02_examples.pdf |
| REDCapDM slides | REDCapDM_presentation.pdf |
| REDCapTidieR slides | REDCapTidieR_slides.pdf |
| REDCapR slides | write-to-server.pdf |
If you would like to download a copy of the slides click the Download raw file button:
To use tidyREDCap with this project add this line to your .Renvion file:
IDEA_R_Medicine_2023_Public = "C94575BEF917A428CD9E92E5E99F0A5B"
The slides are produced using R Markdown with Xaringan other add-on packages. If you don't have the emo package you need to get it. You will need to build emo. That code requires RTools for Windows or Xcode for Mac (it is in the Mac App Store) to be installed on your computer. After adding RTools or XCode run these three lines:
if (!requireNamespace("devtools")) install.packages("devtools")
if (!requireNamespace("remotes")) install.packages("remotes")
remotes::install_github("hadley/emo", quiet = TRUE)Add a folder data to the project directory.
After that you will need to pull the data one time. To do that, find the two code chunks that contain # run me once and run those two code chunks.
Coming Soon
In the live class Ray mentioned his keyboard shortcuts. They are described on a post on his Derailment blog. You can read about and download his R, R Markdown and Quarto snippets from the post called Using RStudio Code Snippets Including Quarto.
This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International License