fastq read count

mean_qual

Description

Script counts amount of reads in *.fastq(.gz) or *.fq(.gz) file(s).

Script writes it's output to file fastq_read_count_result.tsv if tab-separated format.

Options

-h (--help): print help message;

-v (--version): print version;

Usage

python3 fastq_read_count.py first.fastq second.fastq.gz third.fq.gz

Following command will process all *.fastq(.gz) and *.fq(.gz) files in the working directory:

python3 fastq_read_count.py