Interactivity does not work in Jupyter Lab #66

lschr · 2018-09-12T11:06:23Z

Everything works fine in Jupyter Notebook, but not in Jupyter Lab (version 0.34.7).

Styling of the buttons does not seem to work
The buttons have no functionality; e.g. pressing the panning button does not enable panning

On the Javascript console I can the following error whenever the mouse pointer enters the area of the figure, which may or may not be related:

feanor12 · 2018-09-12T12:54:14Z

I had a similar problem when I was using a notebook which had output cells with plots generated by (%matplotlib notebook)

I fixed it by:

delete all output cells
save notebook
reload page
restart kernel
run with %matplotlib widget

I think that %matplotlib notebook injects some kind of javascript that kills something inside jupyter lab.

lschr · 2018-09-12T13:02:45Z

@feanor12 Thanks, it looks like you are right. After restarting and clearing all output, the buttons work (except for the "power" button, which has already been reported in #61) and also the mouse pointer coordinates are shown properly in the bottom right corner.

The buttons still look Windows 95-ish, though (not sure if this is a bug).

feanor12 · 2018-09-13T10:46:34Z

So maybe this is the cause for #62 as well.

MerlinPendragon · 2018-09-13T12:30:12Z

@feanor12 Yes!

pdeitel · 2018-09-15T15:11:18Z

Is this supposed to work with Matplotlib FuncAnimations too? All I get is a blank output and the FuncAnimation itself--which works just fine in IPython in a Terminal window--does not call the update function I defined for each frame. Thanks in advance for any suggestions.

EDIT: FuncAnimation works if the frames argument is an integer. It does not work if it's a generator function, which is what I am trying to use.

tacaswell · 2018-09-15T22:00:49Z

@pdeitel that is extremely odd. I am a bit worried that your generator is raising someplace and the exceptions are getting snarfed incorrectly. Internally, the animation module homgonizes all the input to generators (an integer gets turned into range).

tacaswell · 2018-09-15T22:02:23Z

I think that %matplotlib notebook injects some kind of javascript that kills something inside jupyter lab.

Yes, all of the js to make the plot interactive is inserted by the notebook backend (which is why it does not work in jlab as they have closed that convenient but large security hole).

goiosunsw · 2018-09-20T13:33:30Z

Additionally to @feanor12's recipe I had to close all tabs on the right hand side (open notebooks). Probably their javascript was still interfering with ipympl

mischki · 2018-12-18T18:28:06Z

Same problem and clearing outputs, restarting etc doesn't work. Any ideas? I've tried this in Chrome, Safari..

pdeitel · 2018-12-18T19:25:35Z

@pdeitel that is extremely odd. I am a bit worried that your generator is raising someplace and the exceptions are getting snarfed incorrectly. Internally, the animation module homgonizes all the input to generators (an integer gets turned into range).

I have not gone back to try this again recently, but I will be sometime in the next two weeks. I have all exceptions dumping text so I can see the problems that occur, so there should not be any getting "snarfed".

amueller · 2019-01-28T22:49:23Z

Seems related so adding here:
If I try

% matplotlib widget

in a notebook that had %matplotlib notebook before, I get

Warning: Cannot change to a different GUI toolkit: widget. Using notebook instead.

I understand this to mean "use % matplotlib notebook instead" which seems bad advice. Maybe that's not what it means?
I know I'm doing it wrong, but I think the warning is misleading.

dopplershift · 2019-01-29T00:54:45Z

It means once you’ve run %matplotlib notebook, you can’t later switch to %matplotlib widget (because the two will use different event loops). You need to only ever use one or the other while the kernel is running.

Open to suggestions to language that would make that more clear, but unfortunately that’s exactly what the existing message says to me (but then again I’ve been doing this for way too long).

amueller · 2019-01-29T01:25:11Z

Hm that's not what I understood from the message, and you can't use notebook at all in jupyter lab so the second sentence is confusing.
I would just say "Cannot change to different GUI toolkit widget from toolkit notebook" or "after already activating toolkit notebook"?
Or just your explanation "Can't change to toolkit widget since you already ran %matplotlib notebook"

amueller · 2019-01-29T01:26:46Z

I think I might have misread "using" as "use" on my first read which probably added to the confusion, so feel free to ignore me.

thomasaarholt · 2019-01-29T11:07:14Z

The warning should probably explain why it cannot change backend, or at least how the user can use a different one.

My suggestion below is verbose, but I think 50% of basic users have probably encountered this error message and then become very confused or worried.

How about changing

Warning: Cannot change to a different GUI toolkit: widget. Using notebook instead.

to

Warning: Cannot change GUI toolkit from notebook to widget. 
Only the inline and *one* interactive toolkit can be used together. 
Restart kernel to use a different toolkit.

pdeitel · 2019-01-29T12:08:35Z

How about adding something like “Cannot use %matplotlib notebook and %matplotlib widget in the same notebook because they use different event loops”? On Jan 29, 2019, at 6:07 AM, Thomas Aarholt <notifications@github.com> wrote: The warning should probably explain why it cannot change backend, or at least how the user can use a different one. My suggestion below is verbose, but I think 50% of basic users have probably encountered this error message and then become very confused or worried. How about changing Warning: Cannot change to a different GUI toolkit: widget. Using notebook instead. to Warning: Cannot change GUI toolkit from notebook to widget. Only the inline and *one* interactive toolkit can be used together. Restart kernel to use a different toolkit. — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub, or mute the thread.

tobiasjj · 2019-02-05T14:44:36Z

Probably another solution, which works for me in both, notebook and jupyterlab (up to version 0.35.4):

import matplotlib
matplotlib.use('module://ipympl.backend_nbagg')

from matplotlib import pyplot as plt
fig, ax = plt.subplots()
ax.plot([1,2,3], [4,3,2])
fig.show()

yt87 · 2019-02-24T22:03:32Z

I still see the behaviour as described by @MerlinPendragon in his original post issue #62 on Firefox. On Chromium the example runs fine.

I am on Fedora 29.

$ conda list | grep jupyter                       
jupyter                   1.0.0                      py_1    conda-forge
jupyter_client            5.2.4                      py_0    conda-forge
jupyter_console           6.0.0                      py_0    conda-forge
jupyter_core              4.4.0                      py_0    conda-forge
jupyterlab                0.35.3                   py37_0  
jupyterlab_launcher       0.13.1                     py_2    conda-forge
jupyterlab_server         0.2.0                    py37_0

$ rpm -q firefox
firefox-64.0-4.fc29.x86_64

$ jupyter labextension list                       
JupyterLab v0.35.3
Known labextensions:
   app dir: /mnt/sdc1/home/gtrojan/miniconda3/envs/devel/share/jupyter/lab
        @deathbeds/jupyterlab-fonts v0.6.0  enabled  OK
        @jupyter-widgets/jupyterlab-manager v0.38.1  enabled  OK
        @pyviz/jupyterlab_pyviz v0.6.4  enabled  OK
        jupyter-matplotlib v0.3.0  enabled  OK
        jupyterlab_vim v0.10.1  enabled  OK

steviestevepy · 2019-03-02T12:51:06Z

import matplotlib
matplotlib.use('module://ipympl.backend_nbagg')

This solution worked form me, only after restarting the kernel and jupyterlab.
Looks like the widget function has bugs. After manipulating the graph and then hitting the button to turn off interactivity the graph goes all fuzzy and turns to black and white.
I don't know what the issue is for that

flutefreak7 · 2019-03-20T04:37:24Z

What about:

Matplotlib is currently configured to use the notebook backend which is suitable for the classic Jupyter Notebook and derivatives (and does not work in JupyterLab). Matplotlib does not support changing from the notebook backend to the widget backend while the kernel is running. To use the widget backend, which is supported by JupyterLab, it is recommended that you restart your kernel and clear all output cells. See (insert helpful link to docs) for details.

edit: I'm trying to make a point that brevity is not always helpful when something critical breaks. This reminds me of the classic "Unable to find VCVARSALL.BAT" error message. It tells you exactly what went wrong, but not the obvious helpful things you need to know to fix it.

changjiong · 2019-07-21T16:30:37Z

It means once you’ve run %matplotlib notebook, you can’t later switch to %matplotlib widget (because the two will use different event loops). You need to only ever use one or the other while the kernel is running.

Open to suggestions to language that would make that more clear, but unfortunately that’s exactly what the existing message says to me (but then again I’ve been doing this for way too long).

right, just restart the kernal and run %matplotlib widget

cottrell · 2019-11-13T20:13:01Z

None of the suggestions work currently. This was working recently.

Only see the text:

Canvas(toolbar=Toolbar(toolitems=[('Home', 'Reset original view', 'home', 'home'), ('Back', 'Back to previous …

martinRenou · 2019-11-14T07:50:10Z

@cottrell can you tell us how you installed ipympl? You might have missed an installation step.

I think this issue should be closed. ipympl does work in JupyterLab now.

jasongrout · 2019-11-14T13:46:27Z

I think this issue should be closed. ipympl does work in JupyterLab now.

As you wish. @cottrell, feel free to open a new issue with more comprehensive information about your environment and a reproducible test case.

cottrell · 2019-11-18T22:51:00Z

Interesting ... I just tried at home on a Linux system (again following https://stackoverflow.com/questions/50149562/jupyterlab-interactive-plot) and everything works again.

Will try again on the work setup ... likely some interaction or version issue.

Chang-Hsinyi · 2020-05-17T05:49:57Z

Hi,

I use %matplotlib ipympl, all the functions can work, exclude resize function at the below right corner.
Does anyone know what the problem is, and how can I fix it? thanks

ijpulidos · 2020-06-07T04:10:26Z

I'm still facing the issue here. All I get is that Canvas(toolbar=Toolbar(toolitems=[('Home', 'Reset original view', 'home', 'home'), ('Back', 'Back to previous …

Jupyterlab 2.1.4
ipympl 0.5.6

You can find the Pipfile and Pipfile.lock files in https://gist.github.com/ijpulidos/81edbe253bdbbe270e94a0eff75f34c0 (using pipenv to manage the environment)

ijpulidos · 2020-06-07T04:25:32Z

Ok, had to manually run jupyter labextension install @jupyter-widgets/jupyterlab-manager@2 for them to work. Not really sure why or how all of this works, but that did it for me.

anoetzli · 2020-08-11T07:03:52Z

Ok, had to manually run jupyter labextension install @jupyter-widgets/jupyterlab-manager@2 for them to work. Not really sure why or how all of this works, but that did it for me.

Thank you - this solution worked for me on
Jupyerlab 2.2.4
ipympl 0.5.7

All of those are because they did not restart JupyterLab matplotlib#275 matplotlib#148 matplotlib#66 matplotlib#201 Happened to me also, It might make people run back to notebook

jasongrout closed this as completed Nov 14, 2019

orena1 mentioned this issue Nov 23, 2020

Add instruction to restart jupyterlab #279

Closed

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Interactivity does not work in Jupyter Lab #66

Interactivity does not work in Jupyter Lab #66

lschr commented Sep 12, 2018

feanor12 commented Sep 12, 2018

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feanor12 commented Sep 13, 2018

MerlinPendragon commented Sep 13, 2018

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tacaswell commented Sep 15, 2018

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goiosunsw commented Sep 20, 2018

mischki commented Dec 18, 2018

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yt87 commented Feb 24, 2019

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martinRenou commented Nov 14, 2019

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cottrell commented Nov 18, 2019

Chang-Hsinyi commented May 17, 2020

ijpulidos commented Jun 7, 2020

ijpulidos commented Jun 7, 2020

anoetzli commented Aug 11, 2020

Interactivity does not work in Jupyter Lab #66

Interactivity does not work in Jupyter Lab #66

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lschr commented Sep 12, 2018

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