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Maximum indel length #2

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mbhall88 opened this issue Jan 22, 2024 · 1 comment
Closed

Maximum indel length #2

mbhall88 opened this issue Jan 22, 2024 · 1 comment

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@mbhall88
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What is the maximum length of indels we want to evaluate. I arbitrarily default to 50bp, but am very happy to change this.
@esteinig
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Mirroring Ryan's response from Slack that there is no objective threshold and this sounds totally reasonable for small "structural variants" - no strong opinion from me either!

mbhall88 added a commit that referenced this issue Jan 23, 2024
@mbhall88
add max_indel param to config [#2]
5149502
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@esteinig @mbhall88