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What is Docker Flame Graphs?

Docker Flame graphs (DFG) is a CPU Flame Graph generator that profiles JVMs processes running inside Docker containers.

Flame graphs (FGs) are a visualization of profiled software, allowing the most frequent code-paths to be identified quickly and accurately.

This project provides scripts and guidelines to:

  • Generate different docker-based software configurations using CAMP
  • Run stress tests over generated configurations using Jmeter
  • Profile and record stack traces of running processes
  • Generate configuration-specific Flame Graphs
  • Generate differential Flame Graphs, useful to compare different profiles performance

Flame Graphs for Java

In order to generate FGs, one needs a profiler that can sample stack traces. FGs use the Linux perf toolset (http://www.brendangregg.com/perf.html) to profile any kernel and user space processes in a Linux machine.

Even though, perf and FGs are amazing tools to profile Linux processes, it remains challenging to profile Java processes. More, if the Java process is in a container, it’s even more annoying. Hence, to profile JVMs, we use Perf-map-agent (https://github.com/jvm-profiling-tools/perf-map-agent) which generates flame graphs and allows perf top for Java programs by (1) attaching to the JVM and getting a symbol map, and (2) running perf top of perf record with the map file.

When a JVM is inside a Docker container it’s inside its own PID namespace typically running as a user that only exists inside the container. This means that the JVM appears to have a different PID on the host than it does in the container.

To make java perf agent work, we:

  • Mount perf-map-agent inside each of our containers (e.g. have it on every server and mount the volume read only).
  • Get the symbol map from inside the container using the container PID and copy it to the host tmp directory. Renaming it from the container PID to the host PID.
  • Run perf on the host as root to get top or a FG.

You can refer to this blog for more details http://www.batey.info/docker-jvm-flamegraphs.html

How does it work?

1- Run a sample Java process in a container

Although you can run any java application in a Docker container, in this tutorial, we are going to take advantage of the CAMP project to generate different java processes in Docker containers. In fact, CAMP allows us to generate different docker-based configurations for a given software from an input project template. To use CAMP, please follow the following instructions:

Clone the project.

git clone https://github.com/mboussaa/docker-flame-graphs.git

We provide a sample docker-based project called Spring-petclinic which is a popular spring-based web application https://github.com/spring-projects/spring-petclinic that supports different types of DB (HSQLDB, Postgres, MySQL) and Jetty as web sever.

cd docker-flame-graphs/sample-projects/spring-petclinic/

NB: Before generating configurations, please edit the camp.yml file by giving your host machine ip (use ifconfig and provide the en0 ip).

pattern: "IP_ADDRESS"
replacements: [ "XXX.XXX.XXX.XXX" ] #provide your host machine IP

Generate configurations to support different DB (PetClinic app + MySQL and PetClinic app + Postgres).

docker run -t -v $PWD:/campworkingdir -v /var/run/docker.sock:/var/run/docker.sock -t fchauvel/camp:latest camp generate -d /campworkingdir
docker run -t -v $PWD:/campworkingdir -v /var/run/docker.sock:/var/run/docker.sock -t fchauvel/camp:latest camp realize -d /campworkingdir

Select one of the two generated applications to run, available in out/.

cd out/config_1/ #or cd out/config_2/
docker-compose up -d #do not run in a detached mode if you would like to check logs

Two containers will be created, one for the web app, and one for the database.

To verify that the application is well started, please browse: http://localhost:8080.

2- Set up the Docker FGs profiler

Go back to the project root.

cd ~/docker-flame-graphs

Make sure that JAVA_HOME is configured to point to a JDK. You also need cmake >= 2.8.6 (tested version cmake version 3.5.1).

Build the project.

cmake . && make

Identify the container ID (CONTAINER_ID) of the PetClinic application using:

docker ps

On the host, pick up the Java process ID (JAVA_ID) of the PetClinic application using:

ps aux | grep java

Verify that JAVA_HOME (of the container not the host) points to the right JDK in create-java-perf-map.sh

vi bin/create-java-perf-map.sh
export JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64/

Attach the Docker FG profiler to the running container.

#In ~/docker-flame-graphs
docker cp $(pwd) [CONTAINER_ID]:/docker-flame-graphs

Now everything is ready. You need to warm up you application to collect stack traces. We are going to generate some load to our running PetClinic application using some stress tests.

3- Run stress tests

Open a new terminal tab and install Jmeter on your host machine.

apt install jmeter

Run stress tests.

#In ~/docker-flame-graphs/sample-projects/spring-petclinic/tests
jmeter -n -t petclinic_test_plan.jmx -l out/jtllog.csv -j out/jmeterrun.log

IMPORTANT: Right after starting Jmeter tests, you should quickly start profiling and generating FG (while tests are running) by following Step 4 described below.

4- Profile and generate Flame Graphs

docker-perf-top and docker-perf-java-flames are the most important scripts of this project. They take as input the CONTAINER_ID and JAVA_ID and generate an SVG file representing the FG of the target process.

You might specify the time for which perf record will be running to record stack traces. Stress tests will run for almost 10 minutes. So, you can specify 600 seconds as perf record time.

cd bin
vi docker-perf-java-record-stack
PERF_RECORD_SECONDS=60 #default value is 60 seconds

Start recording stack traces and generating FGs.

./docker-perf-top CONTAINER_ID JAVA_ID
./docker-perf-java-flames CONTAINER_ID JAVA_ID

Flame graphs will be generated in bin/. You can open it with your web browser to visualize system and JVM stack traces.

Now to continue with Step 5, you will need to repeat steps 1 to 4 with the second configuration generated from CAMP.

5- Generate differential Flame Graphs

The difffolded.pl script is used to show the difference between the two previously generated profiles. The input parameters to the script are the two stack traces and the output is also an SVG file.

cd FlameGraph
./difffolded.pl /tmp/out-JAVA_ID.collapsed /tmp/out-JAVA_ID.collapsed | ./flamegraph.pl > flamegraph-differential.svg

Differential Flame graphs will be generated in FlameGraph/. You can open it with your web browser.

Sample Results

Config 1 Flame Graph: PetClinic + MySQL

Alt text

Config 2 Flame Graph: PetClinic + Postgres

Alt text

Differential Flame Graph (FG1 - FG2)

Alt text

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Flame graphs for JVMs running inside Docker containers

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