OncoDiversity

Calculating the generalized diversity index for individual patients across a variety of different cancer datasets, including:

• clustered single cell data
• individual CDR3 sequences recovered from bulk sequencing files (BAM files)
• SomaScan analyte intensities from blood samples

Installation

Pkg.develop(PackageSpec(url="https://github.com/mcfefa/OncoDiversity.jl"))

using OncoDiversity