Fix indentation and error message formatting. Closes #65

mdshw5 · May 8, 2015 · 90dd1ed · 90dd1ed
1 parent 6ae7d3c
commit 90dd1ed
Showing 1 changed file with 4 additions and 4 deletions.
diff --git a/pyfaidx/cli.py b/pyfaidx/cli.py
@@ -48,11 +48,11 @@ def write_sequence(args):
 
 def fetch_sequence(args, fasta, name, start=None, end=None):
     try:
-      line_len = fasta.faidx.index[name].lenc
-      sequence = fasta[name][start:end]
+        line_len = fasta.faidx.index[name].lenc
+        sequence = fasta[name][start:end]
     except KeyError:
-      sys.stderr.write("warning: {name} not found in file".format(**locals()))
-      return
+        sys.stderr.write("warning: {name} not found in file\n".format(**locals()))
+        return
     if args.complement:
         sequence = sequence.complement
     if args.reverse: