Pinned

1. pyfaidx Public

   Efficient pythonic random access to fasta subsequences

   Python 395 68

2. Novartis/pisces Public

   PISCES is a pipeline for rapid transcript quantitation, genetic fingerprinting, and quality control assessment of RNAseq libraries using Salmon.

   Python 26 3

3. fastqp Public

   Simple FASTQ quality assessment using Python

   Python 103 16

4. simplesam Public

   Simple pure Python SAM parser and objects for working with SAM records

   Python 59 8

5. strandex Public

   Sample an approximate number of reads from a fastq file without reading the entire file

   Python 10 1

6. hamstring Public

   Tools for generating and decoding error-correcting DNA barcodes

   Python 15 4