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  1. Efficient pythonic random access to fasta subsequences

    Python 291 48

  2. Simple FASTQ quality assessment using Python

    Python 91 14

  3. Simple pure Python SAM parser and objects for working with SAM records

    Python 39 8

  4. Sample an approximate number of reads from a fastq file without reading the entire file

    Python 9 1

  5. Tools for generating and decoding error-correcting DNA barcodes

    Python 12 4

72 contributions in the last year

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Activity overview
Contributed to mdshw5/pyfaidx, mdshw5/, KevinOConnor/klipper and 5 other repositories

Contribution activity

November 2020

Created 1 repository

Created a pull request in Novartis/ that received 2 comments

Add PISCES to Novartis projects

OAK approved (ID# 43969) Please create the Novartis/pisces repository for me to push to. My GH handle is @mdshw5 Please let me know if there's an…

+15 −0 2 comments

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