This repository contains scripts and commands used to analyze public RNA-seq datasets associated with the manuscript "PRDX-1 supports the survival and antitumor activity of primary and CAR-modified NK cells in oxidative stress", Klopotowska et al., 2020
The repository has two directories:
I) RNA-seq directory contains scripts used to analyze RNA-seq data from experiments E-GEOD-60424, E-GEOD-83808, E-GEOD-83115 and E-GEOD-62920 available at ArrayExpress
II) NKcells_stimulated directory contains scripts used to analyze RNA-seq data from experiment GSE77808 available at GEO