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Build fix #75

Merged
merged 7 commits into from
Apr 3, 2023
Merged

Build fix #75

merged 7 commits into from
Apr 3, 2023

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TuomasBorman
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miaTime cannot even be in "suggests" as it causes an error in build https://master.bioconductor.org/checkResults/3.17/bioc-LATEST/miaViz/nebbiolo1-checksrc.html

@antagomir
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antagomir commented Apr 3, 2023

miaTime cannot even be in "suggests" as it causes an error in build https://master.bioconductor.org/checkResults/3.17/bioc-LATEST/miaViz/nebbiolo1-checksrc.html

Right: we should just finalize that package, and submit to Bioc, when time will allow..

.. and meanwhile indeed just remove from Suggests.. perhaps examples can be moved to miaTime package if useful.

@TuomasBorman
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TuomasBorman commented Apr 3, 2023

Yes, sure

I just disabled miaTime examples and test using data from it because it seems to cause an error

miaTime is using package SEtools which is using biocGenerics::rowSums --> rowSums has moved to MatrixGenerics Bioconductor/BiocGenerics@5d95680

@antagomir
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Ok good to open issues in miaTime but seems you just opened some already.

@TuomasBorman TuomasBorman merged commit f76468f into master Apr 3, 2023
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@TuomasBorman TuomasBorman deleted the build_fix branch April 3, 2023 18:59
TuomasBorman added a commit that referenced this pull request Apr 4, 2023
This reverts commit f76468f.
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2 participants