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create json file for Kitware #4

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wdduncan opened this issue Aug 11, 2021 · 3 comments · Fixed by #5
Closed

create json file for Kitware #4

wdduncan opened this issue Aug 11, 2021 · 3 comments · Fixed by #5
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@wdduncan
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NMDC August 2021 Sprint
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Sprint 5

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@wdduncan
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Kitware needs a json file (similar to envo-basic.json) for ingest into the data portal. Since this file can include classes outside of envo, I will create this file in the nmdc-ontology repo.

For background see this envo ticket: EnvironmentOntology/envo#1198

cc @cmungall @turbomam @jeffbaumes
@wdduncan wdduncan self-assigned this Aug 11, 2021
@wdduncan wdduncan mentioned this issue Aug 12, 2021
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@ssarrafan ssarrafan moved this from To do to In progress in NMDC August 2021 Sprint Aug 13, 2021
@ssarrafan
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Moved to 'in progress' since Bill reported working on this yesterday and today.

@ssarrafan ssarrafan added this to the Sprint 5 milestone Aug 13, 2021
NMDC August 2021 Sprint automation moved this from In progress to Done Aug 17, 2021
@wdduncan
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@jeffbaumes see the nmco.json and nmdco-classes.json files.
Let me know if these work for you.

@jeffbaumes jeffbaumes mentioned this issue Aug 17, 2021
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@jeffbaumes
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Thanks, we will take a look. I cross-linked this over to microbiomedata/nmdc-server#361

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Issue 4: Genererate json file for Kitware microbiomedata/nmdc-ontology
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@jeffbaumes @wdduncan @ssarrafan