Scripts for statistics and plotting figures in "A specialized metabolic network selectively modulates Arabidopsis root microbiota", published in XXX 2019.
- /data # metadata, OTU table and taxonomy files
- /figN # raw data, Rmarkdown scripts and output HTML format results
- figX.Rmd # X is number, including the reproducable R scripts for each panel in figure
- figX.html # Readability HTML report by R markdown, include annotations, scripts and figures
- script/ # General R scripts used in this study
If you used these scripts, please cited the paper below:
Ancheng C. Huang*, Ting Jiang*, Yong-Xin Liu, Yue-Chen Bai, James Reed, Baoyuan Qu, Alain Goossens, Hans-Wilhelm Nützmann, Yang Bai†, Anne Osbourn†. A specialized metabolic network selectively modulates Arabidopsis root microbiota. 2019. Science. DOI: http://dx.doi.org/10.1126/science.aau6389
Cite this article as A. C. Huang et al., Science 364, eaau6389 (2019). DOI: 10.1126/science.aau6389