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dbolotin committed Sep 10, 2015
1 parent ed9161f commit 7ec7537
Showing 1 changed file with 6 additions and 6 deletions.
12 changes: 6 additions & 6 deletions CHANGELOG_CURRENT
Original file line number Diff line number Diff line change
Expand Up @@ -5,9 +5,9 @@ Two new filtering options in `exportAlignmentsPretty`: `--cdr3-contains` and `--
Default value for `-OjParameters.parameters.floatingRightBound` changed to `false`
New parameters: `-OincludeDScore` and `-OincludeCScore` for `align` action. If set to `true` score of `D` or `C` gene will be added to total alignment score
New action: `mergeAlignments` to merge several *.vdjca files into one
minor: Additional micro filtration step for paired-end read aligner (work in very rear cases)
minor: Fixed bug leading to incorrect behaviour if `readsLayout=Unknown`
minor: Correct progress reporting with `-n` option in align action.
minor: Added export options -vHitsWithoutScores (same for J and D genes)
minor: Added support for optional compression of .vdjca and .clns files (when specifying additional `.gz` extension: e.g. `mixcr align inut.fastq output.vdjca.gz` etc.)
minor: Correct handling of quotes in parameters overriding
Minor: Additional micro filtration step for paired-end read aligner (work in very rear cases)
Minor: Fixed bug leading to incorrect behaviour if `readsLayout=Unknown`
Minor: Correct progress reporting with `-n` option in align action.
Minor: Added export options -vHitsWithoutScores (same for J and D genes)
Minor: Added support for optional compression of .vdjca and .clns files (when specifying additional `.gz` extension: e.g. `mixcr align inut.fastq output.vdjca.gz` etc.)
Minor: Correct handling of quotes in parameters overriding

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