Dquartets Output error in Dsuite

[ashnareyaz]

Hello ,
I have been trying to use Dquartets and though everything worked fine and the program ran successfully but on completion the output files just had the heading-[P1 P2 P3 P4 Dstatistic Z-score p-value f4-ratio BBAA ABBA BABA] and no data . My SETS.txt file did not have any sample mentioned with Outgroup keyword , also it had 5 species with sample id and species id being tab separated. I'm not sure what went wrong, If you could please help me in this regard.

[yangwukaidi]

hello,
I have the same problem as you. Do you have a solution for it?

[jqrichmond]

Same issue with me, exactly. This seems to be a bug. If anybody can give us a hand, I'd appreciate it. Thanks.

[wuyh0328]

I also encountered the same problem. Have you solved your problem?

[jqrichmond]

No, I had to give up and move on. I spent as much time as I could trying to figure it out.

[ShaolinXU]

Try commit: 4d7671c

git clone ...
cd Dsuite
git checkout 4d7671c
make 

Then run Dquartets as you want,

[jqrichmond]

Yes, thank you. I did this a while back and was able to run it no problem. Apologies – I thought I had commented on the github that I was able to get it to run using the update. -Jonathan Jonathan Richmond, PhD U.S. Geological Survey 4165 Spruance Rd. Suite 200 San Diego CA 92101 Phone: 619-225-6434 https://www.researchgate.net/profile/Jonathan-Richmond From: Shaolin Xu ***@***.***> Date: Saturday, July 20, 2024 at 1:50 PM To: millanek/Dsuite ***@***.***> Cc: Richmond, Jonathan Q ***@***.***>, Comment ***@***.***> Subject: [EXTERNAL] Re: [millanek/Dsuite] Dquartets Output error in Dsuite (Issue #78) This email has been received from outside of DOI - Use caution before clicking on links, opening attachments, or responding. Try commit: 4d7671c<4d7671c> git clone ... cd Dsuite git checkout 4d7671c make Then run Dquartets as you want, — Reply to this email directly, view it on GitHub<#78 (comment)>, or unsubscribe<https://github.com/notifications/unsubscribe-auth/AJAPDPORH4GJKRFTB6ZXY73ZNLERVAVCNFSM6AAAAABLGHA55CVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDENBRGI4TCMBSGE>. You are receiving this because you commented.Message ID: ***@***.***>