docs: update api figures, part of #19

mishra-lab · Nov 11, 2021 · 628521e · 628521e
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diff --git a/docs/api/fig/app/chi.api.phase.pdf b/docs/api/fig/app/chi.api.phase.pdf
diff --git a/docs/api/fig/app/inc.s.age.mix.pdf → docs/api/fig/app/chi.api.prev.cat.pdf b/docs/api/fig/app/inc.s.age.mix.pdf → docs/api/fig/app/chi.api.prev.cat.pdf
diff --git a/docs/api/fig/app/inc.s.act.mix.pdf → docs/api/fig/app/chi.art.cd4.pdf b/docs/api/fig/app/inc.s.act.mix.pdf → docs/api/fig/app/chi.art.cd4.pdf
diff --git a/docs/api/fig/app/d.api.prev.cat.pdf → docs/api/fig/app/chi.art.cov.cat.pdf b/docs/api/fig/app/d.api.prev.cat.pdf → docs/api/fig/app/chi.art.cov.cat.pdf
diff --git a/docs/api/fig/app/chi.art.rbeta.cat.pdf b/docs/api/fig/app/chi.art.rbeta.cat.pdf
diff --git a/docs/api/fig/chi.s.Risk.both.pdf → docs/api/fig/app/chi.s.Risk.both.pdf b/docs/api/fig/chi.s.Risk.both.pdf → docs/api/fig/app/chi.s.Risk.both.pdf
diff --git a/docs/api/fig/app/chi.s.Risk.pdf b/docs/api/fig/app/chi.s.Risk.pdf
diff --git a/docs/api/fig/app/chi.s.act.HR.pr.pdf b/docs/api/fig/app/chi.s.act.HR.pr.pdf
diff --git a/docs/api/fig/app/chi.s.act.HRM.p.pdf b/docs/api/fig/app/chi.s.act.HRM.p.pdf
diff --git a/docs/api/fig/app/chi.s.act.HRW.cr.pdf b/docs/api/fig/app/chi.s.act.HRW.cr.pdf
diff --git a/docs/api/fig/app/chi.s.act.HRW.p.pdf b/docs/api/fig/app/chi.s.act.HRW.p.pdf
diff --git a/docs/api/fig/app/chi.s.act.def.sex.pdf b/docs/api/fig/app/chi.s.act.def.sex.pdf
diff --git a/docs/api/fig/app/chi.s.act.mix.pdf b/docs/api/fig/app/chi.s.act.mix.pdf
diff --git a/docs/api/fig/app/chi.s.act.n.pdf b/docs/api/fig/app/chi.s.act.n.pdf
diff --git a/docs/api/fig/app/chi.s.act.turn.any.pdf b/docs/api/fig/app/chi.s.act.turn.any.pdf
diff --git a/docs/api/fig/app/chi.s.age.mix.pdf b/docs/api/fig/app/chi.s.age.mix.pdf
diff --git a/docs/api/fig/app/chi.s.age.n.pdf b/docs/api/fig/app/chi.s.age.n.pdf
diff --git a/docs/api/fig/app/chi.s.api.inc.pdf b/docs/api/fig/app/chi.s.api.inc.pdf
diff --git a/docs/api/fig/app/chi.s.api.phase.pdf b/docs/api/fig/app/chi.s.api.phase.pdf
diff --git a/docs/api/fig/app/chi.s.api.prev.pdf b/docs/api/fig/app/chi.s.api.prev.pdf
diff --git a/docs/api/fig/app/chi.s.art.cd4.pdf b/docs/api/fig/app/chi.s.art.cd4.pdf
diff --git a/docs/api/fig/app/chi.s.art.cov.pdf b/docs/api/fig/app/chi.s.art.cov.pdf
diff --git a/docs/api/fig/app/chi.s.art.drop.any.pdf b/docs/api/fig/app/chi.s.art.drop.any.pdf
diff --git a/docs/api/fig/app/chi.s.art.fail.any.pdf b/docs/api/fig/app/chi.s.art.fail.any.pdf
diff --git a/docs/api/fig/app/chi.s.art.init.pdf b/docs/api/fig/app/chi.s.art.init.pdf
diff --git a/docs/api/fig/app/chi.s.art.rbeta.pdf b/docs/api/fig/app/chi.s.art.rbeta.pdf
diff --git a/docs/api/fig/app/chi.s.art.tdr.pdf b/docs/api/fig/app/chi.s.art.tdr.pdf
diff --git a/docs/api/fig/app/chi.s.bc.any.pdf b/docs/api/fig/app/chi.s.bc.any.pdf
diff --git a/docs/api/fig/app/chi.s.hiv.morb.any.pdf b/docs/api/fig/app/chi.s.hiv.morb.any.pdf
diff --git a/docs/api/fig/app/chi.s.hiv.x.acute.pdf b/docs/api/fig/app/chi.s.hiv.x.acute.pdf
diff --git a/docs/api/fig/app/chi.s.hiv.x.late.pdf b/docs/api/fig/app/chi.s.hiv.x.late.pdf
diff --git a/docs/api/fig/app/chi.s.pt.def.pdf b/docs/api/fig/app/chi.s.pt.def.pdf
diff --git a/docs/api/fig/app/d.act.HRM.p.pdf b/docs/api/fig/app/d.act.HRM.p.pdf
diff --git a/docs/api/fig/app/d.act.HRW.p.pdf b/docs/api/fig/app/d.act.HRW.p.pdf
diff --git a/docs/api/fig/app/d.act.n.pdf b/docs/api/fig/app/d.act.n.pdf
diff --git a/docs/api/fig/app/d.age.n.pdf b/docs/api/fig/app/d.age.n.pdf
diff --git a/docs/api/fig/app/d.api.inc.pdf b/docs/api/fig/app/d.api.inc.pdf
diff --git a/docs/api/fig/app/d.api.phase.pdf b/docs/api/fig/app/d.api.phase.pdf
diff --git a/docs/api/fig/app/d.api.prev.pdf b/docs/api/fig/app/d.api.prev.pdf
diff --git a/docs/api/fig/app/d.art.rbeta.pdf b/docs/api/fig/app/d.art.rbeta.pdf
diff --git a/docs/api/fig/app/d.hiv.n.pdf b/docs/api/fig/app/d.hiv.n.pdf
diff --git a/docs/api/fig/app/d.pt.def.pdf b/docs/api/fig/app/d.pt.def.pdf
diff --git a/docs/api/fig/app/inc.api.phase.pdf b/docs/api/fig/app/inc.api.phase.pdf
diff --git a/docs/api/fig/app/d.Risk.pdf → docs/api/fig/app/inc.api.prev.cat.pdf b/docs/api/fig/app/d.Risk.pdf → docs/api/fig/app/inc.api.prev.cat.pdf
diff --git a/docs/api/fig/app/inc.art.cd4.pdf b/docs/api/fig/app/inc.art.cd4.pdf
diff --git a/docs/api/fig/app/d.act.HR.pr.pdf → docs/api/fig/app/inc.art.cov.cat.pdf b/docs/api/fig/app/d.act.HR.pr.pdf → docs/api/fig/app/inc.art.cov.cat.pdf
diff --git a/docs/api/fig/app/inc.art.rbeta.cat.pdf b/docs/api/fig/app/inc.art.rbeta.cat.pdf
diff --git a/docs/api/fig/inc.s.Risk.both.pdf → docs/api/fig/app/inc.s.Risk.both.pdf b/docs/api/fig/inc.s.Risk.both.pdf → docs/api/fig/app/inc.s.Risk.both.pdf
diff --git a/docs/api/fig/app/inc.s.Risk.pdf b/docs/api/fig/app/inc.s.Risk.pdf
diff --git a/docs/api/fig/app/inc.s.act.HR.pr.pdf b/docs/api/fig/app/inc.s.act.HR.pr.pdf
diff --git a/docs/api/fig/app/inc.s.act.HRM.p.pdf b/docs/api/fig/app/inc.s.act.HRM.p.pdf
diff --git a/docs/api/fig/app/inc.s.act.HRW.cr.pdf b/docs/api/fig/app/inc.s.act.HRW.cr.pdf
diff --git a/docs/api/fig/app/inc.s.act.HRW.p.pdf b/docs/api/fig/app/inc.s.act.HRW.p.pdf
diff --git a/docs/api/fig/app/inc.s.act.def.sex.pdf b/docs/api/fig/app/inc.s.act.def.sex.pdf
diff --git a/docs/api/fig/app/inc.s.act.n.pdf b/docs/api/fig/app/inc.s.act.n.pdf
diff --git a/docs/api/fig/app/inc.s.act.turn.any.pdf b/docs/api/fig/app/inc.s.act.turn.any.pdf
diff --git a/docs/api/fig/app/inc.s.age.n.pdf b/docs/api/fig/app/inc.s.age.n.pdf
diff --git a/docs/api/fig/app/inc.s.api.inc.pdf b/docs/api/fig/app/inc.s.api.inc.pdf
diff --git a/docs/api/fig/app/inc.s.api.phase.pdf b/docs/api/fig/app/inc.s.api.phase.pdf
diff --git a/docs/api/fig/app/inc.s.api.prev.pdf b/docs/api/fig/app/inc.s.api.prev.pdf
diff --git a/docs/api/fig/app/inc.s.art.cd4.pdf b/docs/api/fig/app/inc.s.art.cd4.pdf
diff --git a/docs/api/fig/app/inc.s.art.cov.pdf b/docs/api/fig/app/inc.s.art.cov.pdf
diff --git a/docs/api/fig/app/inc.s.art.drop.any.pdf b/docs/api/fig/app/inc.s.art.drop.any.pdf
diff --git a/docs/api/fig/app/inc.s.art.fail.any.pdf b/docs/api/fig/app/inc.s.art.fail.any.pdf
diff --git a/docs/api/fig/app/inc.s.art.init.pdf b/docs/api/fig/app/inc.s.art.init.pdf
diff --git a/docs/api/fig/app/inc.s.art.rbeta.pdf b/docs/api/fig/app/inc.s.art.rbeta.pdf
diff --git a/docs/api/fig/app/inc.s.art.tdr.pdf b/docs/api/fig/app/inc.s.art.tdr.pdf
diff --git a/docs/api/fig/app/inc.s.bc.any.pdf b/docs/api/fig/app/inc.s.bc.any.pdf
diff --git a/docs/api/fig/app/inc.s.hiv.morb.any.pdf b/docs/api/fig/app/inc.s.hiv.morb.any.pdf
diff --git a/docs/api/fig/app/inc.s.hiv.x.acute.pdf b/docs/api/fig/app/inc.s.hiv.x.acute.pdf
diff --git a/docs/api/fig/app/inc.s.hiv.x.late.pdf b/docs/api/fig/app/inc.s.hiv.x.late.pdf
diff --git a/docs/api/fig/app/inc.s.pt.def.pdf b/docs/api/fig/app/inc.s.pt.def.pdf
diff --git a/docs/api/fig/map.pdf → docs/api/fig/app/map.pdf b/docs/api/fig/map.pdf → docs/api/fig/app/map.pdf
diff --git a/docs/api/fig/app/d.act.HRW.cr.pdf → docs/api/fig/chi.Risk.pdf b/docs/api/fig/app/d.act.HRW.cr.pdf → docs/api/fig/chi.Risk.pdf
diff --git a/docs/api/fig/inc.Risk.pdf b/docs/api/fig/inc.Risk.pdf