Updated curl cmds for the GCBM dynamic endpoints

local/rest_api_gcbm/curl.md

@@ -1,29 +1,32 @@
 <h3> GCBM API Endpoints </h3>
 
 ### Create a new GCBM simulation
-The title of a new simulation can be passed or the default title `simulation` will be used. (i.e the default title of the simulation is `simulation`, here the title `run4` is used)
 
-| **Method** | **Endpoint** | **Response code** | 
-|---  | ---| --- |
-| POST| `/gcbm/new` | 200 OK (Success) |
+The title of a new simulation can be passed or the default title `simulation` will be used. (i.e the default title of the simulation is `simulation`, here the title `run4` is used)
 
+| **Method** | **Endpoint** | **Response code** |
+| ---------- | ------------ | ----------------- |
+| POST       | `/gcbm/new`  | 200 OK (Success)  |
 
 Example:
+
 ```
 curl -d "title=run4" -X POST http://localhost:8080/gcbm/new
 ```
 
 Expected response (Success):
+
 ```json
 {
-  "data":  "New simulation started. Please move on to the next stage for uploading files at /gcbm/upload." 
+  "data": "New simulation started. Please move on to the next stage for uploading files at /gcbm/upload."
 }
 ```
 
-### Upload configuration files 
+### Upload configuration files
+
 Upload all of the files required to run the simulation.
-| **Method** | **Endpoint** | **Response codes** | 
-|---  | ---| --- |
+| **Method** | **Endpoint** | **Response codes** |
+|--- | ---| --- |
 | POST| `/gcbm/upload` | 200 OK (Success), 400 (Error) |
 
 Example:
@@ -54,19 +57,154 @@ curl -F disturbances='@disturbances/disturbances_2011_moja.tiff' \
 ```
 
 Expected response (Success):
+
 ```json
 {
   "data": "All files uploaded succesfully. Proceed to the next step of the API at gcbm/dynamic."
 }
 ```
 
-### Run the simulation 
-After uploading your files, you can run the simulation through this endpoint.
+You can upload all the simulation files at once or upload them separately. To upload files separately follow the commands below.
+
+### Upload Disturbances file
+
+Upload Disturbances file to run the simulation.
+| **Method** | **Endpoint** | **Response codes** |
+|--- | ---| --- |
+| POST| `/gcbm/upload/disturbances` | 200 OK (Success), 400 (Error) |
+
+Example:
+
+Go to the location of the unzipped file `GCBM_New_Demo_Run.zip`
+
+```
+cd path-to-unzipped-file
+```
+
+Upload all the files present in the disturbances folder.
+
+```
+curl -F disturbances='@disturbances/disturbances_2011_moja.tiff' \
+		-F disturbances='@disturbances/disturbances_2012_moja.tiff' \
+		-F disturbances='@disturbances/disturbances_2013_moja.tiff' \
+		-F disturbances='@disturbances/disturbances_2014_moja.tiff' \
+		-F disturbances='@disturbances/disturbances_2015_moja.tiff' \
+		-F disturbances='@disturbances/disturbances_2016_moja.tiff' \
+		-F disturbances='@disturbances/disturbances_2018_moja.tiff' \
+		-F title="run4" \
+		http://localhost:8080/gcbm/upload/disturbances
+```
+
+Expected response (Success):
+
+```json
+{
+  "data": "Disturbances file uploaded succesfully. Proceed to the next step."
+}
+```
+
+### Upload Classifiers file
+
+Upload Classifiers file to run the simulation.
+| **Method** | **Endpoint** | **Response codes** |
+|--- | ---| --- |
+| POST| `/gcbm/upload/classifiers` | 200 OK (Success), 400 (Error) |
+
+Example:
+
+Go to the location of the unzipped file `GCBM_New_Demo_Run.zip`
+
+```
+cd path-to-unzipped-file
+```
+
+Upload all the files present in the disturbances folder.
+
+```
+curl -F classifiers='@classifiers/Classifier1_moja.tiff' \
+		-F classifiers='@classifiers/Classifier2_moja.tiff' \
+		-F title="run4" \
+		http://localhost:8080/gcbm/upload/classifiers
+```
+
+Expected response (Success):
+
+```json
+{
+  "data": "Classifiers file uploaded succesfully. Proceed to the next step."
+}
+```
 
-| **Method** | **Endpoint** | **Response code** | 
-|---  | ---| --- |
-| POST | `/gcbm/dynamic` | 200 OK (Success) |
+### Upload Miscellaneous file
 
+Upload Miscellaneous file to run the simulation.
+| **Method** | **Endpoint** | **Response codes** |
+|--- | ---| --- |
+| POST| `/gcbm/upload/miscellaneous` | 200 OK (Success), 400 (Error) |
+
+Example:
+
+Go to the location of the unzipped file `GCBM_New_Demo_Run.zip`
+
+```
+cd path-to-unzipped-file
+```
+
+Upload all the files present in the disturbances folder.
+
+```
+curl -F miscellaneous='@miscellaneous/initial_age_moja.tiff' \
+		-F miscellaneous='@miscellaneous/mean_annual_temperature_moja.tiff' \
+		-F title="run4" \
+		http://localhost:8080/gcbm/upload/miscellaneous
+```
+
+Expected response (Success):
+
+```json
+{
+  "data": "Miscellaneous file uploaded succesfully. Proceed to the next step."
+}
+```
+
+### Upload db file
+
+Upload db file to run the simulation.
+| **Method** | **Endpoint** | **Response codes** |
+|--- | ---| --- |
+| POST| `/gcbm/upload/db` | 200 OK (Success), 400 (Error) |
+
+Example:
+
+Go to the location of the unzipped file `GCBM_New_Demo_Run.zip`
+
+```
+cd path-to-unzipped-file
+```
+
+Upload all the files present in the disturbances folder.
+
+```
+curl -F db='@db/gcbm_input.db' \
+		-F title="run4" \
+		http://localhost:8080/gcbm/upload/db
+```
+
+Expected response (Success):
+
+```json
+{
+  "data": "db file uploaded succesfully. Proceed to the next step."
+}
+```
+
+### Run the simulation
+
+After uploading your files, you can run the simulation through this endpoint.
+
+| **Method** | **Endpoint**    | **Response code** |
+| ---------- | --------------- | ----------------- |
+| POST       | `/gcbm/dynamic` | 200 OK (Success)  |
 
 Example:
 
@@ -75,59 +213,63 @@ curl -d "title=run4" -X POST http://localhost:8080/gcbm/dynamic
 ```
 
 Expected response (Success):
+
 ```json
 {
   "status": "Run started"
 }
 ```
 
-### Get status of the simulation 
-
-| **Method** | **Endpoint** | **Response code** | 
-|---  | ---| --- |
-| POST | `/gcbm/status` | 200 OK (Success) |
+### Get status of the simulation
 
+| **Method** | **Endpoint**   | **Response code** |
+| ---------- | -------------- | ----------------- |
+| POST       | `/gcbm/status` | 200 OK (Success)  |
 
 ```
 curl -d "title=run4" -X POST http://localhost:8080/gcbm/status
 ```
 
-
 Expected response (In progress):
+
 ```json
 {
   "finished": "In Progress"
 }
 ```
 
 Expected response (When simulation completes):
+
 ```json
 {
   "finished": "Output is ready to download at gcbm/download"
 }
 ```
 
-### Download the result of simulation 
-| **Method** | **Endpoint** | **Response code** | 
-|---  | ---| --- |
-| POST | `/gcbm/download` | 200 OK (Success) |
+### Download the result of simulation
+
+| **Method** | **Endpoint**     | **Response code** |
+| ---------- | ---------------- | ----------------- |
+| POST       | `/gcbm/download` | 200 OK (Success)  |
 
 A file named `output.zip` will be obtained. This file contains the outputs generated, which can be analysed on unzipping.
 
 ```
 curl -d "title=run4" -X POST http://localhost:8080/gcbm/download -L -o run4.zip
 ```
 
-### List all of the simulations 
-| **Method** | **Endpoint** | **Response code** | 
-|---  | ---| --- |
-| GET | `/gcbm/list` | 200 OK (Success) |
+### List all of the simulations
+
+| **Method** | **Endpoint** | **Response code** |
+| ---------- | ------------ | ----------------- |
+| GET        | `/gcbm/list` | 200 OK (Success)  |
 
 ```
 curl http://localhost:8080/gcbm/list
 ```
 
 Expected response (Success):
+
 ```json
 {
   "data": ["run4"],