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GADO Command line datasets
Patrick Deelen edited this page Jul 11, 2021
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For the GADO manual see this page: https://github.com/molgenis/systemsgenetics/wiki/GADO-Command-line
This dataset is recommended for most uses
- Prediction matrix (Extract before use)
- Prediction info file
- Genes
- HPO ontology file
- Prediction matrix: hpo_predictions_sigOnly_spiked_01_02_2018.zip (Extract before use)
- Prediction info file: hpo_predictions_info_01_02_2018.txt
- Genes: hpo_predictions_genes_01_02_2018.txt
- HPO build 135: hp.obo
- Prediction matrix (Extract before use)
- Prediction info file
- Genes
- HPO ontology file
- Prediction matrix: hpo_predictions_sigOnly_01_02_2018.zip (Extract before use)
- Prediction info file: hpo_predictions_info_01_02_2018.txt
- Genes: hpo_predictions_genes_01_02_2018.txt
- HPO build 135: hp.obo
- QTL mapping pipeline
- Genotype Harmonizer
- Genotype IO
- ASE
- GADO Command line
- Downstreamer
- GeneNetwork Analysis
Analysis plans
Other