v1.0.0-RC4
Pre-release
Pre-release
Squirls
- make the code repository public, enable Read the Docs integration
squirls-cli
- finalize the HTML report and SVG graphics layout
- allow writing results in multiple result formats, including VCF, TSV/CSV
- report positions of candidate cryptic variants
- add distribution zip
squirls-core
- use
apiguardian-api
to label the API elements - use
svart v1.0.0
to represent variants, genomic regions, and the other genomic coordinates - remove external dependencies such as
JBlas
,
squirls-ingest
- download genomic assembly report
- calculate SHA256 checksums
- replace
argparse4j
bypicocli
squirls-io
- create the module for handling creation of Squirls structures
squirls-spring-boot-autoconfigure
- fix bug involving database initialization in HPC environments