Merge pull request #312 from kshefchek/fix-flybase-xrefs

change equivalent/sameAs to xref when processing dbxref table
monarch-initiative · May 17, 2016 · 85f0c95 · 85f0c95
2 parents b29821e + 7844bc9
commit 85f0c95
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/dipper/sources/FlyBase.py b/dipper/sources/FlyBase.py
@@ -1476,10 +1476,10 @@ def _process_feature_dbxref(self, limit):
                                 # these are only omim diseases, not genes;
                                 # we shouldn't be adding these here anyway
                                 gu.addClassToGraph(g, did, dlabel)
-                                gu.addEquivalentClass(g, feature_id, did)
+                                gu.addXref(g, feature_id, did)
                         else:
                             gu.addIndividualToGraph(g, did, dlabel)
-                            gu.addSameIndividual(g, feature_id, did)
+                            gu.addXref(g, feature_id, did)
                         line_counter += 1
 
                 if not self.testMode \