Merge branch 'frequency-awareness'

monarch-initiative · Mar 7, 2017 · 6d2d4dd · 6d2d4dd
2 parents 0511c20 + d436fdf
commit 6d2d4dd
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Showing 2 changed files with 2 additions and 2 deletions.
diff --git a/...rchinitiative/owlsim/compute/matcher/NaiveBayesFixedWeightTwoStateProfileMatcherTest.java b/...rchinitiative/owlsim/compute/matcher/NaiveBayesFixedWeightTwoStateProfileMatcherTest.java
@@ -81,7 +81,7 @@ public void testExamplePositiveOnly() throws Exception {
 	}
 
     @Test
-    public void testFrequencyWare() throws Exception {
+    public void testFrequencyAware() throws Exception {
         loadSimplePhenoWithFrequency();
         //LOG.info("INDS="+kb.getIndividualIdsInSignature());
         ProfileMatcher profileMatcher = createProfileMatcher(kb);

diff --git a/...test/java/org/monarchinitiative/owlsim/compute/matcher/PhenodigmICProfileMatcherTest.java b/...test/java/org/monarchinitiative/owlsim/compute/matcher/PhenodigmICProfileMatcherTest.java
@@ -75,7 +75,7 @@ public void testCompareProfileFile() throws Exception {
                 Set<String> tcids = kb.getClassIds(kb.getDirectTypesBM(j));
                 ProfileQuery tp = profileMatcher.createProfileQueryFromClasses(tcids, null);
 
-                                String fn = i.replaceAll(".*/", "");
+                String fn = i.replaceAll(".*/", "");
                 //eval.writeJsonTo("target/pdgm-test-results-"+fn+".json");
                 Match pairMatch = profileMatcher.compareProfilePair(qp, tp);