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Implement mono graph #448

Merged
merged 9 commits into from
Nov 20, 2023
Merged

Implement mono graph #448

merged 9 commits into from
Nov 20, 2023

Commits on Oct 31, 2023

  1. Setup benchmark stubs.

    @ielis
    ielis committed Oct 31, 2023
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  2. Refactor CsrOntologyGraph to CsrPolyOntologyGraph.

    @ielis
    ielis committed Oct 31, 2023
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Commits on Nov 1, 2023

  1. Implement CsrMonoOntologyGraph. Fix bug in CsrPolyOntologyGraph t… 

    …hat supports to iterate over the iterable only once. Improve `OntologyGraph` testing.
    @ielis
    ielis committed Nov 1, 2023
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  2. Expose mono CSR builder through OntologyGraphBuilders.

    @ielis
    ielis committed Nov 1, 2023
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  3. Setup benchmark for poly vs. mono. Use mono by default in `MinimalOnt… 

    …ologyLoader` and `OntologyLoader`.
    @ielis
    ielis committed Nov 1, 2023
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  4. Use hash map instead of binary search. Extend benchmarks.

    @ielis
    ielis committed Nov 1, 2023
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  5. Add bench results

    @ielis
    ielis committed Nov 1, 2023
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Commits on Nov 3, 2023

  1. Set max line length to 120.

    @ielis
    ielis committed Nov 3, 2023
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  2. Improve documentation and logging.

    @ielis
    ielis committed Nov 3, 2023
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