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Plots #163

Merged
merged 13 commits into from
Oct 5, 2023
Merged

Plots #163

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dd0fca4
update article readme
rebeccanash Sep 26, 2023
874fe00
move legend to align axes
rebeccanash Sep 26, 2023
cae5cf2
new plot theme
rebeccanash Oct 3, 2023
b12a325
new theme edits
rebeccanash Oct 4, 2023
60c8c6d
add theme to all plots
rebeccanash Oct 4, 2023
623aa77
update description with patchwork
rebeccanash Oct 4, 2023
d2ca841
lintr code cleaning
rebeccanash Oct 4, 2023
39de191
add functions to documentation
rebeccanash Oct 4, 2023
1f09219
update namespace
rebeccanash Oct 4, 2023
d0c3c67
remove gghighlight
rebeccanash Oct 4, 2023
3cdf1e8
add gghighlight
rebeccanash Oct 4, 2023
f784474
update man plot file
rebeccanash Oct 4, 2023
4cfb1d4
fix lint warnings
rebeccanash Oct 4, 2023
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3 changes: 2 additions & 1 deletion DESCRIPTION
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Original file line number Diff line number Diff line change
Expand Up @@ -42,7 +42,8 @@ Imports:
abind,
gghighlight,
epitrix,
distcrete
distcrete,
patchwork
Suggests:
testthat,
utils,
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9 changes: 9 additions & 0 deletions NAMESPACE
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Expand Up @@ -42,8 +42,13 @@ importFrom(distcrete,distcrete)
importFrom(epitrix,gamma_mucv2shapescale)
importFrom(epitrix,r2R0)
importFrom(fitdistrplus,fitdist)
importFrom(ggplot2,"%+replace%")
importFrom(ggplot2,aes)
importFrom(ggplot2,aes_string)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_line)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,element_text)
importFrom(ggplot2,geom_histogram)
importFrom(ggplot2,geom_hline)
importFrom(ggplot2,geom_line)
Expand All @@ -53,10 +58,13 @@ importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggtitle)
importFrom(ggplot2,last_plot)
importFrom(ggplot2,lims)
importFrom(ggplot2,margin)
importFrom(ggplot2,scale_colour_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_linetype_manual)
importFrom(ggplot2,scale_y_continuous)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_light)
importFrom(ggplot2,xlab)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylab)
Expand All @@ -65,6 +73,7 @@ importFrom(grDevices,palette)
importFrom(graphics,plot)
importFrom(incidence,as.incidence)
importFrom(incidence,incidence)
importFrom(patchwork,plot_layout)
importFrom(scales,alpha)
importFrom(stats,median)
importFrom(stats,pgamma)
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