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Simulations of a recessive lethal genetic disorder in horses

This repository contains simulation code for the paper:

Ablondi M, Johnsson M, Eriksson S, Sabbioni A, Gelinder Viklund Å, Mikko S. (2022) Performance of Swedish Warmblood fragile foal syndrome carriers and breeding prospects. Genetics Selection Evolution https://gsejournal.biomedcentral.com/articles/10.1186/s12711-021-00693-4

Contents

R/simulation_functions.R contains helper functions to support the main simulation script R/divergence_simulation.R.

The scripts folder contains bash scripts to run many replicates of this simulation with different parameters.

The R Markdown file Rmd/divergence_simulation.Rmd summarises the results of those simulations.

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Simulations of a recessive lethal genetic disorder

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