udpates

mrvollger · Feb 18, 2023 · a455778 · a455778
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 A snakemake workflow for the mutyper python package.
 
-### Notes for analysis in Vollger et al., 2023
+## Notes for analysis in Vollger et al., 2023
 
 The workflow can be run using `run.sh` however annotation files and additional inputs must be downloaded and absolute paths in `config.yaml` updated.
 
-#### Annotation files
+### Annotation files:
 Annotation files can be found [here](https://github.com/mrvollger/sd-divergence/tree/master/config/annotations).
 
-#### Additional inputs:
+### Additional inputs:
 Additional inputs used in `config.yaml` can be found on [Zenodo](https://doi.org/10.5281/zenodo.6792653).