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  1. metasv metasv Public

    Forked from bioinform/metasv

    MetaSV: An accurate and integrative structural-variant caller for next generation sequencing

    Python

  2. IDP IDP Public

    Forked from bioinform/IDP

    IDP is a statistical isoform prediction method to construct possible isoform candidates from the union of long reads and short reads with spliced alignment

    Python

  3. convert2bed convert2bed Public

    Forked from alexpreynolds/convert2bed

    Convert common binary and text genomic formats to BED

    C

  4. somaticseq somaticseq Public

    Forked from bioinform/somaticseq

    An ensemble approach to accurately detect somatic mutations using SomaticSeq

    Python

  5. bamsurgeon bamsurgeon Public

    Forked from adamewing/bamsurgeon

    tools for adding mutations to existing .bam files, used for testing mutation callers

    Python

  6. fusioncatcher fusioncatcher Public

    Forked from ndaniel/fusioncatcher

    Finder of Somatic Fusion Genes in RNA-seq data

    Python