Added a fix for CPLEX and gurobi overlap check #25
Workflow file for this run
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| # Workflow derived from https://github.com/r-lib/actions/tree/master/examples | |
| # Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
| on: | |
| push: | |
| branches: [master, zc_dev] | |
| pull_request: | |
| branches: [master] | |
| name: R-CMD-check | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ubuntu-latest | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| JAB: ${{ secrets.JAB }} | |
| URL: ${{ secrets.URL }} | |
| R_CHECK_ARGS: "--no-build-vignettes --no-manual --as-cran --no-examples" | |
| _R_CHECK_TESTS_NLINES_: 0 | |
| R_REMOTES_NO_ERRORS_FROM_WARNINGS: TRUE | |
| R_KEEP_PKG_SOURCE: yes | |
| RCMDCHECK_ERROR_ON: error | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| use-public-rspm: true | |
| r-version: '4.0.2' | |
| - name: cplex setup | |
| run: | | |
| set -x | |
| curl -OL $URL | |
| mv jabba.tar.gz.gpg?dl=0 jabba.tar.gz.gpg | |
| gpg --pinentry-mode=loopback --passphrase="$JAB" --output jabba.tar.gz --decrypt jabba.tar.gz.gpg | |
| mkdir $HOME/my.cplex && tar -xvzf jabba.tar.gz --directory $HOME/my.cplex/ | |
| - name: set environment variables | |
| run: | | |
| set -x | |
| echo "R_REMOTES_NO_ERRORS_FROM_WARNINGS=TRUE" >> $GITHUB_ENV | |
| echo "CPLEX_DIR=$HOME/my.cplex" >> $GITHUB_ENV | |
| echo "CPLEX_INCLUDE_PATH=$HOME/my.cplex/include" >> $GITHUB_ENV | |
| echo "CPLEX_LIB_PATH=$HOME/my.cplex/lib" >> $GITHUB_ENV | |
| - name: verify environment variables are set! | |
| run: | | |
| set -x | |
| echo "Value of CPLEX_DIR: $CPLEX_DIR" | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| cache: true | |
| cache-version: 1 | |
| extra-packages: | | |
| any::rcmdcheck | |
| any::covr | |
| needs: coverage | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| error-on: '"error"' | |
| - name: Show testthat output | |
| if: always() | |
| run: find check -name 'testthat.Rout*' -exec cat '{}' \; || true | |
| shell: bash | |
| - name: Check unit test coverage | |
| uses: codecov/codecov-action@v3 | |
| - name: Upload check results | |
| if: failure() | |
| uses: actions/upload-artifact@main | |
| with: | |
| name: ${{ runner.os }}-r${{ matrix.config.r }}-results | |
| path: check | |
| - name: manual debugging | |
| if: failure() | |
| uses: mxschmitt/action-tmate@v3 |