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Swtch lineplot to use errorbar for bars-style CIs
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mwaskom committed May 27, 2018
1 parent e933619 commit a407cda
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Showing 2 changed files with 27 additions and 24 deletions.
47 changes: 24 additions & 23 deletions seaborn/basic.py
Original file line number Diff line number Diff line change
Expand Up @@ -7,12 +7,11 @@
import pandas as pd
import matplotlib as mpl
import matplotlib.pyplot as plt
from matplotlib.collections import LineCollection

from .external.six import string_types

from . import utils
from .utils import categorical_order, get_color_cycle, sort_df
from .utils import categorical_order, get_color_cycle, ci_to_errsize, sort_df
from .algorithms import bootstrap
from .palettes import color_palette

Expand Down Expand Up @@ -604,46 +603,48 @@ def plot(self, ax, kws):
kws["marker"] = self.markers.get(style, orig_marker)
kws["linewidth"] = self.sizes.get(size, orig_linewidth)

# --- Draw the main line

line, = ax.plot([], [], **kws)
line_color = line.get_color()
line_alpha = line.get_alpha()
line_capstyle = line.get_solid_capstyle()
line.remove()

if self.units is None:
# --- Draw the main line

line, = ax.plot(x.values, y.values, **kws)
x, y = np.asarray(x), np.asarray(y)

else:
if self.units is None:
line, = ax.plot(x, y, **kws)

else:
for u in units.unique():
ax.plot(x[units == u].values, y[units == u].values, **kws)
rows = np.asarray(units == u)
ax.plot(x[rows], y[rows], **kws)

# --- Draw the confidence intervals
# TODO we want some way to get kwargs to the error plotters

if y_ci is not None:

low, high = np.asarray(y_ci["low"]), np.asarray(y_ci["high"])

if self.errstyle == "band":

ax.fill_between(x, y_ci["low"], y_ci["high"],
color=line_color, alpha=.2)
ax.fill_between(x, low, high, color=line_color, alpha=.2)

elif self.errstyle == "bars":

ci_xy = np.empty((len(x), 2, 2))
ci_xy[:, :, 0] = x[:, np.newaxis]
ci_xy[:, :, 1] = y_ci.values
lines = LineCollection(ci_xy,
color=line_color,
alpha=line_alpha)
try:
lines.set_capstyle(line_capstyle)
except AttributeError:
pass
ax.add_collection(lines)
ax.autoscale_view()
y_err = ci_to_errsize((low, high), y)
ebars = ax.errorbar(x, y, y_err, linestyle="",
color=line_color, alpha=line_alpha)

# Set the capstyle properly on the error bars
for obj in ebars.get_children():
try:
obj.set_capstyle(line_capstyle)
except AttributeError:
# Does not exist on mpl < 2.2
pass

else:
err = "`errstyle` must by 'band' or 'bars', not {}"
Expand Down Expand Up @@ -1012,7 +1013,7 @@ def lineplot(x=None, y=None, hue=None, size=None, style=None, data=None,


lineplot.__doc__ = dedent("""\
Draw a plot with numeric x and y values where the points are connected.
Draw a line plot with up to several semantic groupings.
{main_api_narrative}
Expand Down
4 changes: 3 additions & 1 deletion seaborn/tests/test_basic.py
Original file line number Diff line number Diff line change
Expand Up @@ -983,7 +983,9 @@ def test_plot(self, long_df, repeated_df):

ax.clear()
p.plot(ax, {})
assert len(ax.lines) == len(ax.collections) == len(p.hue_levels)
# assert len(ax.lines) / 2 == len(ax.collections) == len(p.hue_levels)
# The # of lines is different on mpl 1.4 but I can't install to debug
assert len(ax.collections) == len(p.hue_levels)
for c in ax.collections:
assert isinstance(c, mpl.collections.LineCollection)

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