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PoPS 1.0.0

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@wenzeslaus wenzeslaus released this 10 Sep 19:23
8edb661

This is version 1.0.0 of the PoPS Core C++ library and its interfaces: rpops R package and r.pops.spread GRASS GIS module. The release of PoPS Core includes:

  • Susceptible-infected (SI) and susceptible-exposed-infected (SEI) host phases,
  • Host mortality tracking,
  • Host removal and pesticide application treatments,
  • Host resistance based on pesticide application treatments,
  • Treatments applied only to a ratio of hosts,
  • Seasonal spread limited to certain months,
  • Limited host movement (experimental),
  • Yearly pest removal based on lethal temperature,
  • Two different dispersal kernels (natural and anthropogenic),
  • Cauchy and exponential radial dispersal kernels,
  • Reduced stochasticity options and deterministic versions of kernels,
  • Spread rate measurement,
  • Quarantine and study area escape measurements,
  • C++ API centered around two classes: pops::Model and pops::Config.