Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Distribute node positions over MPI processes #2181

Merged
merged 47 commits into from
Nov 11, 2021

Conversation

hakonsbm
Copy link
Contributor

@hakonsbm hakonsbm commented Oct 8, 2021

Node positions are with this PR stored only on the process where the corresponding node is created. This fixes #2174.

@hakonsbm hakonsbm added T: Bug Wrong statements in the code or documentation S: Critical Needs to be addressed immediately I: No breaking change Previously written code will work as before, no one should note anything changing (aside the fix) labels Oct 8, 2021
@hakonsbm hakonsbm added this to the NEST 3.2 milestone Oct 8, 2021
@hakonsbm hakonsbm added this to PRs in progress in Kernel via automation Oct 8, 2021
Copy link
Contributor

@stinebuu stinebuu left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks! I have some suggestions and questions :)

nestkernel/free_layer.h Outdated Show resolved Hide resolved
nestkernel/free_layer.h Outdated Show resolved Hide resolved
nestkernel/free_layer.h Outdated Show resolved Hide resolved
nestkernel/spatial.cpp Outdated Show resolved Hide resolved
Kernel automation moved this from PRs in progress to PRs pending approval Oct 13, 2021
Copy link
Contributor

@stinebuu stinebuu left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Looks good to me!

Kernel automation moved this from PRs pending approval to PRs approved Oct 22, 2021
Copy link
Contributor

@heplesser heplesser left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Hi @hakonsbm! Thanks a lot! Now I just have a few small suggestions left, then this should be ready :).

lib/sli/nest-init.sli Outdated Show resolved Hide resolved
lib/sli/nest-init.sli Outdated Show resolved Hide resolved
lib/sli/nest-init.sli Outdated Show resolved Hide resolved
nestkernel/nestmodule.cpp Outdated Show resolved Hide resolved
nestkernel/node_collection.h Outdated Show resolved Hide resolved
pynest/nest/lib/hl_api_types.py Outdated Show resolved Hide resolved
pynest/nest/lib/hl_api_types.py Outdated Show resolved Hide resolved
pynest/nest/lib/hl_api_types.py Outdated Show resolved Hide resolved
hakonsbm and others added 2 commits November 10, 2021 11:04
Co-authored-by: Hans Ekkehard Plesser <hans.ekkehard.plesser@nmbu.no>
Copy link
Contributor

@stinebuu stinebuu left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks! I only have some suggestions to changes to some of the comments.

nestkernel/free_layer.h Outdated Show resolved Hide resolved
nestkernel/nestmodule.cpp Outdated Show resolved Hide resolved
testsuite/pytests/test_NodeCollection.py Outdated Show resolved Hide resolved
testsuite/pytests/test_NodeCollection.py Outdated Show resolved Hide resolved
testsuite/pytests/test_NodeCollection.py Outdated Show resolved Hide resolved
hakonsbm and others added 2 commits November 10, 2021 15:28
Co-authored-by: Stine Brekke Vennemo <stine.vennemo@gmail.com>
Copy link
Contributor

@heplesser heplesser left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks a lot @hakonsbm!

Kernel automation moved this from PRs pending approval to PRs approved Nov 11, 2021
@heplesser heplesser merged commit a8806dd into nest:master Nov 11, 2021
Kernel automation moved this from PRs approved to Done (PRs and issues) Nov 11, 2021
@hakonsbm hakonsbm deleted the MPI_local_positions branch November 11, 2021 07:44
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
I: No breaking change Previously written code will work as before, no one should note anything changing (aside the fix) S: Critical Needs to be addressed immediately T: Bug Wrong statements in the code or documentation
Projects
Kernel
  
Done
Development

Successfully merging this pull request may close these issues.

Creation and storage of node positions is not distributed over MPI processes
3 participants