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add eye in PPI #145

Merged
merged 5 commits into from
Oct 8, 2022
Merged

add eye in PPI #145

merged 5 commits into from
Oct 8, 2022

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marouenbg
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  • PPI has to have a diagnola of ones (which is a bit wrong because it assumes homodimers in PPI)

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codecov bot commented Oct 7, 2022

Codecov Report

Base: 52.28% // Head: 54.79% // Increases project coverage by +2.51% 🎉

Coverage data is based on head (c9515b1) compared to base (cac0d07).
Patch coverage: 100.00% of modified lines in pull request are covered.

Additional details and impacted files
@@            Coverage Diff             @@
##            devel     #145      +/-   ##
==========================================
+ Coverage   52.28%   54.79%   +2.51%     
==========================================
  Files          38       38              
  Lines        1511     1511              
==========================================
+ Hits          790      828      +38     
+ Misses        721      683      -38     
Impacted Files Coverage Δ
netZooM/tools/NormalizeNetwork.m 100.00% <ø> (ø)
netZooM/tools/processData.m 100.00% <100.00%> (+54.28%) ⬆️

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@marouenbg marouenbg merged commit 335884b into netZoo:devel Oct 8, 2022
marouenbg added a commit that referenced this pull request Oct 21, 2022
* update test suite (#140)

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update tests

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update actions

* update github

* update github

* update github

* update github

* update github

* update github

* update github

* fix spider test

* update test data with annotation in lioness

* changed test data lioness

* update test data

* update test data

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* removed macos from tests

* fix savepairs (#142)

* fix savepairs

* fix savepairs

* add eye in PPI (#145)

* add eye in PPI

* update tfcoop

* add python gt data

* add labels to panda test

* expand test data
marouenbg added a commit that referenced this pull request Jun 28, 2023
* update test suite (#140)

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update test suite

* update tests

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update actions

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update ci without spider

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update workflow

* update actions

* update github

* update github

* update github

* update github

* update github

* update github

* update github

* fix spider test

* update test data with annotation in lioness

* changed test data lioness

* update test data

* update test data

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* separte process functions

* removed macos from tests

* fix savepairs (#142)

* fix savepairs

* fix savepairs

* add eye in PPI (#145)

* add eye in PPI

* update tfcoop

* add python gt data

* add labels to panda test

* expand test data

* rename optpanda to boa (#144)

* fix typo (#148)

* fix typo

* update aactions

* update aactions

* update aactions

* update aactions

* fix motif saving pairs

* fix motif saving pairs

* fix motif saving pairs

* fix motif saving pairs

* Update README.md
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