Merge pull request #244 from marouenbg/fix-crane

fix crane issue #240
netZoo · Jun 16, 2022 · c7764ef · c7764ef
2 parents 323d058 + 4a3fdde
commit c7764ef
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diff --git a/DESCRIPTION b/DESCRIPTION
@@ -1,6 +1,6 @@
 Package: netZooR
 Title: netZooR integrates tools for the inference and analysis of gene regulatory networks.
-Version: 1.0.3
+Version: 1.0.4
 Date: 2021-09-20
 Authors@R: c(person("Marouen", "Ben Guebila",
 			email = "benguebila@hsph.harvard.edu", role = c("aut","cre")),

diff --git a/R/CRANE.R b/R/CRANE.R
@@ -110,7 +110,7 @@ alpacaCrane = function(input,alp,alpha=0.1,beta=0,iteration=30,isParallel=F){
   tstat=c()
   if (identical(names(alp[[2]]),rownames(df))){
     for (i in 1:nrow(df)){
-      if (rownames(df)[i]==""){
+      if (rownames(df)[i]=="" || sd(df[i,])==0){
         isSig=c(isSig,NA)
         next
       }

diff --git a/docs/404.html b/docs/404.html
diff --git a/docs/CONDUCT.html b/docs/CONDUCT.html
diff --git a/docs/LICENSE-text.html b/docs/LICENSE-text.html
diff --git a/docs/articles/ALPACA.html b/docs/articles/ALPACA.html
diff --git a/docs/articles/ApplicationinGTExData.html b/docs/articles/ApplicationinGTExData.html
diff --git a/docs/articles/ApplicationwithTBdataset.html b/docs/articles/ApplicationwithTBdataset.html
diff --git a/docs/articles/ApplicationwithTBdataset_files/figure-html/unnamed-chunk-8-1.png b/docs/articles/ApplicationwithTBdataset_files/figure-html/unnamed-chunk-8-1.png
diff --git a/docs/articles/CONDOR.html b/docs/articles/CONDOR.html
diff --git a/docs/articles/CONDOR_files/figure-html/unnamed-chunk-10-1.png b/docs/articles/CONDOR_files/figure-html/unnamed-chunk-10-1.png
diff --git a/docs/articles/CONDOR_files/figure-html/unnamed-chunk-8-1.png b/docs/articles/CONDOR_files/figure-html/unnamed-chunk-8-1.png
diff --git a/docs/articles/EGRET_toy_example.html b/docs/articles/EGRET_toy_example.html