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graph format #37

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gkiar opened this issue Feb 10, 2016 · 4 comments
Closed

graph format #37

gkiar opened this issue Feb 10, 2016 · 4 comments
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@gkiar
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gkiar commented Feb 10, 2016

finalize spec for attributed edge + json graph format. Once completed, this will split into subsequent tasks which are write reader/writer for this format in R and Python.
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gkiar commented Feb 10, 2016

originally discussed here.

@gkiar gkiar mentioned this issue Feb 10, 2016
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@gkiar gkiar added the dev label Feb 10, 2016
@wrgr wrgr self-assigned this Feb 16, 2016
@wrgr wrgr added the this week label Feb 16, 2016
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wrgr commented Feb 16, 2016

I'll lead this one.

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gkiar commented Feb 17, 2016

We (@jovo, @WillGray, @icoming, @disa-mhembere, @gkiar) have come to a decision:

We will store graphs using NetworkX's gpickle format.

The reasons being:

  • any custom method developed by us would be faster and more compact, but only marginally
  • our custom thing would completely unsupported by community, but gpickle is at least supported by networkx
  • our custom thing would take time where this is ready and workable now

@gkiar gkiar closed this as completed Feb 17, 2016
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i think this is an ok resolution

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