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Prioritise cell-type-specific gene targets from the Rare Disease Celltyping project.

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Name		Name	Last commit message	Last commit date
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data		data
gpt_annotations		gpt_annotations
manuscript		manuscript
networks		networks
reports		reports
.gitignore		.gitignore
README.Rmd		README.Rmd
README.md		README.md
RareDiseasePrioritisation.Rproj		RareDiseasePrioritisation.Rproj

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README

Authors:

Momoko Otani, Brian M. Schilder, Nathan G. Skene

README updated: Nov-16-2023

About

Prioritise cell-type-specific gene targets from the Rare Disease Celltyping project.

Thesis project by Momoko Otani, supervised by Nathan Skene and Brian Schilder.

Rmarkdown reports

Prioritise targets

Reduced network

Extended network

HPO annotations

Neurodegeneration

dementia/neurodegeneration vs. diabetes/obesity network

Cardiovascular

Default network

Hierarchical network

Symptoms

Differential outcomes

GPT annotations

Orphanet prevalence data

About

Prioritise cell-type-specific gene targets from the Rare Disease Celltyping project.

genomics scrna-seq clinical-research single-cell-genomics aav rare-disease celltypes

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Report repository

Contributors 2

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