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Use the updated upload_pypi action #108

Merged

lochhh merged 2 commits into main from bump-actions

Feb 7, 2024

Member

niksirbi commented Jan 31, 2024 •

edited

Context

We recently, bumped the versions of many actions in the NIU actions repository, with the help of dependabot. Among many other changes, actions/upload-artifact was bumped to v4.

This change is incompatible with older major versions of actions/download-artifact which we use within this repo's GitHub workflow, specifically in the step that uploads the package to PyPI.

Solution

The easy fix would be to also bump actions/download-artifact to v4 within the workflow, but we want to avoid having to do that for any future actions updates.

Therefore, this PR modifies the PyPI upload logic of the workflow, so that it leverages our reusable upload_pypi action, which has also been updated to fulfill that purpose.

In this way, we should avoid having to modify the individual repo workflows. In the future, the relevant bumps will have to be implemented only upstream, in NIU actions.

How has this been tested

We made a new PyPI release of brainglobe-template-builder using this updated workflow, and it went down smoothly.


          Bump action versions in upload_pypi workflow step

f9a5f30

codecov bot commented Jan 31, 2024 •

edited

Codecov Report

All modified and coverable lines are covered by tests ✅

Comparison is base (9ee30c7) 99.12% compared to head (f9a5f30) 99.12%.
Report is 1 commits behind head on main.

❗ Current head f9a5f30 differs from pull request most recent head d5782cf. Consider uploading reports for the commit d5782cf to get more accurate results

Additional details and impacted files

@@           Coverage Diff           @@
##             main     #108   +/-   ##
=======================================
  Coverage   99.12%   99.12%           
=======================================
  Files           8        8           
  Lines         458      458           
=======================================
  Hits          454      454           
  Misses          4        4

☔ View full report in Codecov by Sentry.
📢 Have feedback on the report? Share it here.


          reuse the upload_pypi action instead of custom steps

d5782cf

sonarcloud bot commented Feb 2, 2024

Quality Gate passed

Kudos, no new issues were introduced!

0 New issues
0 Security Hotspots
No data about Coverage
No data about Duplication

See analysis details on SonarCloud

niksirbi changed the title ~~Bump action versions in upload_pypi workflow step~~ Use the updated upload_pypi action

niksirbi marked this pull request as ready for review

February 2, 2024 15:38

niksirbi requested a review from lochhh

February 2, 2024 15:38

niksirbi mentioned this pull request

Use updated upload_pypi action neuroinformatics-unit/swc-slack#17

Merged

IgorTatarnikov added a commit to brainglobe/brainrender that referenced this pull request


          Update test_and_deploy.yml

1b61b15

See neuroinformatics-unit/movement#108

IgorTatarnikov mentioned this pull request

Use the updated upload_pypi action brainglobe/brainrender#326

Merged

IgorTatarnikov added a commit to brainglobe/brainglobe-heatmap that referenced this pull request


          Update test_and_deploy.yml

f02a0ce

See neuroinformatics-unit/movement#108

This was referenced Feb 2, 2024

Use the udated upload_pypi action brainglobe/brainglobe-heatmap#30

Merged

Use the updated upload_pypi action brainglobe/morphapi#54

Merged

This was referenced Feb 2, 2024

Use updated upload_pypi action neuroinformatics-unit/python-cookiecutter#100

Merged

Use updated upload_pypi action neuroinformatics-unit/slurmio#15

Merged

alessandrofelder pushed a commit to brainglobe/cellfinder that referenced this pull request


          Update test_and_deploy.yml

79e46af

See neuroinformatics-unit/movement#108

alessandrofelder mentioned this pull request

Update test_and_deploy.yml brainglobe/cellfinder#370

Merged

niksirbi mentioned this pull request

Use updated upload_pypi action neuroinformatics-unit/fancylog#25

Merged

alessandrofelder pushed a commit to brainglobe/brainglobe-atlasapi that referenced this pull request


          Update test_and_deploy.yml

501937b

See neuroinformatics-unit/movement#108

alessandrofelder mentioned this pull request

Update test_and_deploy.yml brainglobe/brainglobe-atlasapi#194

Merged

niksirbi mentioned this pull request

Use updated upload_pypi action neuroinformatics-unit/derotation#9

Merged

alessandrofelder pushed a commit to brainglobe/imio that referenced this pull request


          Update test_and_deploy.yml

f8e35c7

See neuroinformatics-unit/movement#108

alessandrofelder mentioned this pull request

Update test_and_deploy.yml brainglobe/imio#52

Merged

alessandrofelder pushed a commit to brainglobe/brainrender-napari that referenced this pull request


          Update test_and_deploy.yml

f6ecedd

See neuroinformatics-unit/movement#108

alessandrofelder mentioned this pull request

Update test_and_deploy.yml brainglobe/brainrender-napari#133

Merged

niksirbi mentioned this pull request

Use updated upload_pypi action SainsburyWellcomeCentre/NeuralPlayground#101

Draft

IgorTatarnikov added a commit to brainglobe/brainglobe-meta that referenced this pull request


          Update test_and_deploy.yml

584492f

See neuroinformatics-unit/movement#108

alessandrofelder pushed a commit to brainglobe/brainreg that referenced this pull request


          Update test_and_deploy.yml

7513b3a

See neuroinformatics-unit/movement#108

alessandrofelder mentioned this pull request

Update test_and_deploy.yml brainglobe/brainreg#178

Merged

IgorTatarnikov mentioned this pull request

Update test_and_deploy.yml brainglobe/brainglobe-meta#45

Merged

IgorTatarnikov added a commit to brainglobe/brainglobe-napari-io that referenced this pull request


          Update test_and_deploy.yml

377b141

See neuroinformatics-unit/movement#108

IgorTatarnikov mentioned this pull request

Use the updated upload_pypi action brainglobe/brainglobe-napari-io#65

Merged

IgorTatarnikov added a commit to brainglobe/brainglobe-registration that referenced this pull request


          Update test_and_deploy.yml

aa4cbee

See neuroinformatics-unit/movement#108

niksirbi mentioned this pull request

Use updated versions of actions SainsburyWellcomeCentre/WAZP#106

Draft

alessandrofelder pushed a commit to brainglobe/brainglobe-workflows that referenced this pull request


          Update test_and_deploy.yml

8c144b8

See neuroinformatics-unit/movement#108

alessandrofelder mentioned this pull request

Update test_and_deploy.yml brainglobe/brainglobe-workflows#81

Merged

IgorTatarnikov mentioned this pull request

Use the update upload_pypi action brainglobe/brainglobe-registration#29

Merged

IgorTatarnikov added a commit to brainglobe/brainglobe-segmentation that referenced this pull request


          Update test_and_deploy.yml

49df2c1

See neuroinformatics-unit/movement#108

IgorTatarnikov mentioned this pull request

Use the updated upload_pypi action brainglobe/brainglobe-segmentation#164

Merged

alessandrofelder pushed a commit to brainglobe/brainglobe-utils that referenced this pull request


          Update test_and_deploy.yml

fe1cd47

See neuroinformatics-unit/movement#108

alessandrofelder mentioned this pull request

Update test_and_deploy.yml brainglobe/brainglobe-utils#30

Merged

IgorTatarnikov mentioned this pull request

Use the updated upload_pypi action brainglobe/brainglobe-space#45

Merged

alessandrofelder pushed a commit to brainglobe/brainglobe-meta that referenced this pull request


          Update test_and_deploy.yml (#45)

57ebec0

See neuroinformatics-unit/movement#108

alessandrofelder pushed a commit to brainglobe/brainglobe-napari-io that referenced this pull request


          Use the updated upload_pypi action (#65)

a391371

See neuroinformatics-unit/movement#108

IgorTatarnikov added a commit to brainglobe/brainreg that referenced this pull request


          Update test_and_deploy.yml (#178)

49067a8

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

alessandrofelder pushed a commit to brainglobe/brainglobe-registration that referenced this pull request


          Use the update upload_pypi action (#29)

7d17da1

See neuroinformatics-unit/movement#108

IgorTatarnikov added a commit to brainglobe/brainglobe-utils that referenced this pull request


          Update test_and_deploy.yml (#30)

d40507e

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

alessandrofelder pushed a commit to brainglobe/brainglobe-segmentation that referenced this pull request


          Use the updated upload_pypi action (#164)

d56de6c

See neuroinformatics-unit/movement#108

IgorTatarnikov added a commit to brainglobe/brainglobe-atlasapi that referenced this pull request


          Update test_and_deploy.yml (#194)

c015a7e

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

alessandrofelder added a commit to brainglobe/imio that referenced this pull request


          Update test_and_deploy.yml (#52)

d1c806b

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

IgorTatarnikov added a commit to brainglobe/brainglobe-workflows that referenced this pull request


          Update test_and_deploy.yml (#81)

3350eae

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

lochhh approved these changes

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lochhh left a comment

thanks @niksirbi !🚀

lochhh merged commit d5b1335 into main

22 checks passed

lochhh deleted the bump-actions branch

February 7, 2024 10:52

willGraham01 pushed a commit to brainglobe/cellfinder that referenced this pull request


          Update test_and_deploy.yml

3f725ab

See neuroinformatics-unit/movement#108

willGraham01 pushed a commit to brainglobe/cellfinder that referenced this pull request


          Update test_and_deploy.yml (#370)

d248806

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

adamltyson added a commit to brainglobe/brainglobe-utils that referenced this pull request


          Merge imio in as image_io submodule (#33)

5a2a2d6

* Initial commit

* bump

* bump

* bump

* add bump2version

* Bump version: 0.0.2 → 0.0.3

* add pre commit hooks

* update testing

* reorder ci

* fix non-istropic loading error

* Bump version: 0.0.3 → 0.0.4

* Gh actions (#3)

* add gh actions

* Update testing

* update testing

* add lint

* coveralls

* coveralls

* deploy

* Bump version: 0.0.4 → 0.0.5

* update readme

* transfer to brainglobe

* run tests on PR

* update coverage

* support python 3.9

* Bump version: 0.0.5 → 0.0.6

* update bump2version

* Bump version: 0.0.6 → 0.1.0-rc0

* Bump version: 0.1.0-rc0 → 0.1.0

* Update setup.py

* add missing import

* Update README.md

* fix linting

* Exclude tests from packaged distributions (#6)

* Update pre commit

* reformat

* Python 3.10 compatibility

* Bump version: 0.1.0 → 0.2.0-rc0

* update GH actions

* Bump version: 0.2.0-rc0 → 0.2.0-rc1

* Bump version: 0.2.0-rc1 → 0.2.0

* Revert older changes

* Fix deprecation of tifffile.imsave replaced by tifffile.imwrite. (#8)

Co-authored-by: Jules Scholler <jules.scholler@wysscenter.ch>

* Bump version: 0.2.1 → 0.2.2-rc0

* Bump version: 0.2.2-rc0 → 0.2.2

* Add link to contributing guide

* Add tox and use brainglobe/actions (#10)

* Add tox and use brainglobe actions for testing

* Update pre-commit

* run pre-commit

* Update tox.ini

* Bump version: 0.2.2 → 0.2.3-rc0

* Bump version: 0.2.3-rc0 → 0.2.3

* Long description (#11)

* Add long description for PyPI

* Bump version: 0.2.3 → 0.2.4-rc0

* Bump version: 0.2.4-rc0 → 0.2.4

* Change coverage badge to codecov.

* Test on recent python versions (#13)

* Test on recent python versions

* Bump pre-commit versions

* Fix dtype issue

* Remove straggling mention of 3.7

* Replace brainglobe > NI actions (#14)

* Use standard pre-commit config  (#15)

* Add standard pre-commit config

* pre-commit fixes

* Use pyproject.toml (#16)

* Filter warnings in pytest (#17)

* Filter warnings in pytest

* Filter nptyping warnings

* Add all-contributors

* Update README.md

Co-authored-by: David Stansby <dstansby@gmail.com>

* docs: add crousseau as a contributor for code, ideas, and test (#25)

* docs: update README.md [skip ci]

* docs: create .all-contributorsrc [skip ci]

* Remove badge

---------

Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
Co-authored-by: Adam Tyson <code@adamltyson.com>

* Don't skip CI for all-contrbutors-bot

* Update .all-contributorsrc

* docs: add jaimergp as a contributor for code (#23)

* docs: update README.md [skip ci]

* docs: create .all-contributorsrc [skip ci]

* Update README.md

---------

Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
Co-authored-by: Adam Tyson <code@adamltyson.com>

* docs: add JulesScholler as a contributor for code (#22)

* docs: update README.md [skip ci]

* docs: create .all-contributorsrc [skip ci]

* Update README.md

* Update .all-contributorsrc

* Update .all-contributorsrc

---------

Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
Co-authored-by: Adam Tyson <code@adamltyson.com>

* docs: add dstansby as a contributor for test, code, and 3 more (#21)

* docs: update README.md [skip ci]

* docs: create .all-contributorsrc [skip ci]

* Update README.md

---------

Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
Co-authored-by: Adam Tyson <code@adamltyson.com>

* docs: add adamltyson as a contributor for code, infra, and 2 more (#24)

* docs: update README.md [skip ci]

* docs: create .all-contributorsrc [skip ci]

* docs: update README.md [skip ci]

* docs: update .all-contributorsrc [skip ci]

* Update README.md

---------

Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
Co-authored-by: Adam Tyson <code@adamltyson.com>

* Update doc links (#27)

* [pre-commit.ci] pre-commit autoupdate (#28)

updates:
- [github.com/charliermarsh/ruff-pre-commit: v0.0.240 → v0.0.272](astral-sh/ruff-pre-commit@v0.0.240...v0.0.272)
- [github.com/psf/black: 23.1.0 → 23.3.0](psf/black@23.1.0...23.3.0)
- [github.com/pre-commit/mirrors-mypy: v0.991 → v1.3.0](pre-commit/mirrors-mypy@v0.991...v1.3.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Update dependency (imlib -> brainglobe-utils) (#29)

* [pre-commit.ci] pre-commit autoupdate (#31)

updates:
- [github.com/charliermarsh/ruff-pre-commit: v0.0.272 → v0.0.275](astral-sh/ruff-pre-commit@v0.0.272...v0.0.275)
- [github.com/pre-commit/mirrors-mypy: v1.3.0 → v1.4.1](pre-commit/mirrors-mypy@v1.3.0...v1.4.1)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* remove all contributors (#32)

* [pre-commit.ci] pre-commit autoupdate (#33)

updates:
- https://github.com/charliermarsh/ruff-pre-commit → https://github.com/astral-sh/ruff-pre-commit
- [github.com/astral-sh/ruff-pre-commit: v0.0.275 → v0.0.276](astral-sh/ruff-pre-commit@v0.0.275...v0.0.276)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#34)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.276 → v0.0.277](astral-sh/ruff-pre-commit@v0.0.276...v0.0.277)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Update CI workflow to use NIU actions (#35)

* [pre-commit.ci] pre-commit autoupdate (#36)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.277 → v0.0.278](astral-sh/ruff-pre-commit@v0.0.277...v0.0.278)
- [github.com/psf/black: 23.3.0 → 23.7.0](psf/black@23.3.0...23.7.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#37)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.278 → v0.0.280](astral-sh/ruff-pre-commit@v0.0.278...v0.0.280)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#38)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.280 → v0.0.281](astral-sh/ruff-pre-commit@v0.0.280...v0.0.281)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#39)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.281 → v0.0.282](astral-sh/ruff-pre-commit@v0.0.281...v0.0.282)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#40)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.282 → v0.0.284](astral-sh/ruff-pre-commit@v0.0.282...v0.0.284)
- [github.com/pre-commit/mirrors-mypy: v1.4.1 → v1.5.0](pre-commit/mirrors-mypy@v1.4.1...v1.5.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#41)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.284 → v0.0.285](astral-sh/ruff-pre-commit@v0.0.284...v0.0.285)
- [github.com/pre-commit/mirrors-mypy: v1.5.0 → v1.5.1](pre-commit/mirrors-mypy@v1.5.0...v1.5.1)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#42)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.285 → v0.0.286](astral-sh/ruff-pre-commit@v0.0.285...v0.0.286)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Set pre-commit autoupdate frequency to monthly (#43)

* [pre-commit.ci] pre-commit autoupdate (#44)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.286 → v0.0.287](astral-sh/ruff-pre-commit@v0.0.286...v0.0.287)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#45)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.0.287 → v0.0.292](astral-sh/ruff-pre-commit@v0.0.287...v0.0.292)
- [github.com/psf/black: 23.7.0 → 23.9.1](psf/black@23.7.0...23.9.1)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#48)

updates:
- [github.com/pre-commit/pre-commit-hooks: v4.4.0 → v4.5.0](pre-commit/pre-commit-hooks@v4.4.0...v4.5.0)
- [github.com/astral-sh/ruff-pre-commit: v0.0.292 → v0.1.4](astral-sh/ruff-pre-commit@v0.0.292...v0.1.4)
- [github.com/psf/black: 23.9.1 → 23.10.1](psf/black@23.9.1...23.10.1)
- [github.com/pre-commit/mirrors-mypy: v1.5.1 → v1.6.1](pre-commit/mirrors-mypy@v1.5.1...v1.6.1)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#49)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.1.4 → v0.1.6](astral-sh/ruff-pre-commit@v0.1.4...v0.1.6)
- [github.com/psf/black: 23.10.1 → 23.11.0](psf/black@23.10.1...23.11.0)
- [github.com/pre-commit/mirrors-mypy: v1.6.1 → v1.7.1](pre-commit/mirrors-mypy@v1.6.1...v1.7.1)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* [pre-commit.ci] pre-commit autoupdate (#50)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.1.6 → v0.1.9](astral-sh/ruff-pre-commit@v0.1.6...v0.1.9)
- [github.com/psf/black: 23.11.0 → 23.12.1](psf/black@23.11.0...23.12.1)
- [github.com/pre-commit/mirrors-mypy: v1.7.1 → v1.8.0](pre-commit/mirrors-mypy@v1.7.1...v1.8.0)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* Update GH actions badge (#51)

* Update test_and_deploy.yml (#52)

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

* Add manifest (#54)

* Update CI workflows with manifest

* Allow workflow to be dispatchable

* Add pyarrow dependency to prevent future pandas failures

* [pre-commit.ci] pre-commit autoupdate (#53)

updates:
- [github.com/astral-sh/ruff-pre-commit: v0.1.9 → v0.2.0](astral-sh/ruff-pre-commit@v0.1.9...v0.2.0)
- [github.com/psf/black: 23.12.1 → 24.1.1](psf/black@23.12.1...24.1.1)

Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>

* refactor image_io as submodule

* Deprecated alias warning is still present

* Fix an actual circular import because of wildcard import

* Fix buggy html logo - wrong escape backslash

---------

Co-authored-by: crousseau <c.rousseau@ucl.ac.uk>
Co-authored-by: Adam Tyson <adam.tyson@ucl.ac.uk>
Co-authored-by: Adam Tyson <code@adamltyson.com>
Co-authored-by: Jaime Rodríguez-Guerra <jaimergp@users.noreply.github.com>
Co-authored-by: Jules Scholler <jules.scholler@gmail.com>
Co-authored-by: Jules Scholler <jules.scholler@wysscenter.ch>
Co-authored-by: David Stansby <dstansby@gmail.com>
Co-authored-by: allcontributors[bot] <46447321+allcontributors[bot]@users.noreply.github.com>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: Alessandro Felder <alessandrofelder@users.noreply.github.com>
Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

niksirbi added a commit that referenced this pull request


          Provide a generic load_poses.from_file() function (#110)

b4ec636

* added from_files() function

* added from_files() function

* Use the updated upload_pypi action (#108)

* Bump action versions in upload_pypi workflow step

* reuse the upload_pypi action instead of custom steps

* adding code review suggestionas and tests

* added log error

* added from_files() function

* added from_files() function

* adding code review suggestionas and tests

* added log error

* formatted docstrign and added to API reference

* added regex matching to ValueError test

* documented new funciton in Getting started guide

* use from_file() for fetching sample data

---------

Co-authored-by: Niko Sirmpilatze <niko.sirbiladze@gmail.com>

willGraham01 pushed a commit to brainglobe/brainrender-napari that referenced this pull request


          Update test_and_deploy.yml (#133)

See neuroinformatics-unit/movement#108

Co-authored-by: Igor Tatarnikov <61896994+IgorTatarnikov@users.noreply.github.com>

alessandrofelder mentioned this pull request

upgrade test and build actions to v2 brainglobe/brainglobe-space#53

Merged

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