Python Binding AverageImage

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Methods

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Example

import numpy as np
import matplotlib.pyplot as plt
import skimage.io as io
from imagalg import AverageImage

img=io.imread('../../UnitTests/data/frame0000_100x100x100.tif').astype('float32')

# Create an instance of the Average image class
avg=AverageImage()

# Average combination
a = avg.process(img,AverageImage.ImageAverage,[])

# Min combiantion
b =avg.process(img,AverageImage.ImageMin,[])

# Max combination
c=avg.process(img,AverageImage.ImageMax,[])

# Median combination
d =avg.process(img,AverageImage.ImageMedian,[])

# Weighted average
e=avg.process(img,AverageImage.ImageWeightedAverage,[])

plt.figure(figsize=[11,6])
plt.subplot(2,3,1)
plt.imshow(a)
plt.title('Average')

plt.subplot(2,3,2)
plt.imshow(b)
plt.title('Min')

plt.subplot(2,3,3)
plt.imshow(c)
plt.title('Max')

plt.subplot(2,3,4)
plt.imshow(d)
plt.title('Median')

plt.subplot(2,3,5)
plt.imshow(e)
plt.title('Weighted Average')
plt.tight_layout()
plt.savefig('avgresults.png')

Runing the example script should produce a plot like