Bump nf-sqldb@0.4.0 [ci fast]

modules/nextflow/src/main/resources/META-INF/plugins-info.txt

@@ -1,5 +1,5 @@
 nf-amazon@1.7.0
-nf-sqldb@0.3.0
+nf-sqldb@0.4.0
 nf-console@1.0.3
 nf-google@1.1.4
 nf-azure@0.13.1

plugins/nf-sqldb/README.md

@@ -77,7 +77,8 @@ The following options are available:
 | Operator option 	| Description 	                |
 |---	            |---	                        |
 | `db`              | The database handle. It must must a `sql.db` name defined in the `nextflow.config` file.
-| `emitColumns      | When `true` the column names in the select statement are emitted as first tuple in the resulting channel.
+| `batchSize`       | Performs the query in batches of the specified size. This is useful to avoid loading the complete resultset in memory for query returning a large number of entries. NOTE: this feature requires that the underlying SQL database to support `LIMIT` and `OFFSET` capability. 
+| `emitColumns`     | When `true` the column names in the select statement are emitted as first tuple in the resulting channel.
 
 ### sqlInsert
 
@@ -104,13 +105,13 @@ NOTE: the target table (e.g. `SAMPLE` in the above example) must be created ahea
 
 The following options are available:
 
-| Operator option 	| Description 	                |
-|---	            |---	                        |
+| Operator option 	 | Description 	                |
+|-------------------|---	                        |
 | `db`              | The database handle. It must must a `sql.db` name defined in the `nextflow.config` file.
 | `into`            | The database table name into with the data needs to be stored.
 | `columns`         | The database table column names to be filled with the channel data. The column names order and cardinality must match the tuple values emitted by the channel. The columns can be specified as a `List` object or a comma-separated value string.
 | `statement`       | The SQL `insert` statement to be performed to insert values in the database using `?` as placeholder for the actual values, for example: `insert into SAMPLE(X,Y) values (?,?)`. When provided the `into` and `columsn` parameters are ignored.
-| `batch`           | The number of insert statements that are grouped together before performing the SQL operations (default: `10`). 
+| `batchSize`       | The number of insert statements that are grouped together before performing the SQL operations (default: `10`). 
 | `setup`           | A SQL statement that's executed before the first insert operation. This is useful to create the target DB table. NOTE: the underlying DB should support the *create table if not exist* idiom (i.e. the plugin will execute this time every time the script is run).
 
 ## Query CSV files

plugins/nf-sqldb/changelog.txt

@@ -1,5 +1,9 @@
 NF-SQLDB CHANGE-LOG
 ===================
+0.4.0 - 9 Apr 2022
+- Add support for batched queries via `batchSize` attribute
+- Add `emitColumns` option fromQuery operator
+
 0.3.0 6 Feb 2022
 - Add support for AWS Athena
 

plugins/nf-sqldb/src/resources/META-INF/MANIFEST.MF

@@ -2,5 +2,5 @@ Manifest-Version: 1.0
 Plugin-Class: nextflow.sql.SqlPlugin
 Plugin-Id: nf-sqldb
 Plugin-Provider: Seqera Labs
-Plugin-Version: 0.3.0
+Plugin-Version: 0.4.0
 Plugin-Requires: >=21.08.0-edge