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nf-wave WaveClient: fix for s5cmdConfigUrl #4707

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merged 4 commits into from Feb 1, 2024
Merged

nf-wave WaveClient: fix for s5cmdConfigUrl #4707

merged 4 commits into from Feb 1, 2024

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marcodelapierre
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This PR adds a small fix in WaveClient, to better handle s5cmdConfigUrl.

This is spun out of #4701, and comes from original Paolo's PR #4554.

internally renames dockerArch to dockerPlat, for better jargon consistency in the codebase and docs. This variable specifies the platform to build containers via Wave, ie X86 or ARM.

Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
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Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
@pditommaso
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Well spotted. Added the support for "magic" type conversion and related tests

@pditommaso pditommaso merged commit 3a19386 into master Feb 1, 2024
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@pditommaso pditommaso deleted the fix/s5cmd branch February 1, 2024 10:51
nschan pushed a commit to nschan/nextflow that referenced this pull request Feb 6, 2024
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Co-authored-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Niklas Schandry <niklas@bio.lmu.de>
nschan pushed a commit to nschan/nextflow that referenced this pull request Feb 6, 2024
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Co-authored-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Niklas Schandry <niklas@bio.lmu.de>
nschan pushed a commit to nschan/nextflow that referenced this pull request Feb 6, 2024
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Co-authored-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Niklas Schandry <niklas@bio.lmu.de>
nschan pushed a commit to nschan/nextflow that referenced this pull request Feb 12, 2024
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Co-authored-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Niklas Schandry <niklas@bio.lmu.de>
nschan pushed a commit to nschan/nextflow that referenced this pull request Feb 12, 2024
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Co-authored-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Niklas Schandry <niklas@bio.lmu.de>
nschan pushed a commit to nschan/nextflow that referenced this pull request Apr 3, 2024
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Co-authored-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Niklas Schandry <niklas@bio.lmu.de>
nschan pushed a commit to nschan/nextflow that referenced this pull request Apr 3, 2024
Signed-off-by: Dr Marco Claudio De La Pierre <marco.delapierre@gmail.com>
Signed-off-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Co-authored-by: Paolo Di Tommaso <paolo.ditommaso@gmail.com>
Signed-off-by: Niklas Schandry <niklas@bio.lmu.de>
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2 participants