Nextflow tests

This repository contains a collection of scripts used to validate Nextflow builds

Name		Name	Last commit message	Last commit date
Latest commit History 299 Commits
bin		bin
blast-db		blast-db
checks		checks
data		data
templates		templates
.gitignore		.gitignore
.travis.yml		.travis.yml
Dockerfile		Dockerfile
LICENSE		LICENSE
README.md		README.md
ampa-dsl2.nf		ampa-dsl2.nf
ampa.nf		ampa.nf
basic-dsl2.nf		basic-dsl2.nf
basic.nf		basic.nf
blast-dsl2.nf		blast-dsl2.nf
blast-parallel-dsl2.nf		blast-parallel-dsl2.nf
blast-parallel.nf		blast-parallel.nf
blast.nf		blast.nf
buffer-dsl2.nf		buffer-dsl2.nf
buffer.nf		buffer.nf
chunk-dsl2.nf		chunk-dsl2.nf
chunk.nf		chunk.nf
cleanup.sh		cleanup.sh
cli-args.nf		cli-args.nf
collect-file.nf		collect-file.nf
collect_and_merge.nf		collect_and_merge.nf
collect_tuple-dsl2.nf		collect_tuple-dsl2.nf
collect_tuple.nf		collect_tuple.nf
complex-names-dsl2.nf		complex-names-dsl2.nf
complex-names.nf		complex-names.nf
config-labels.config		config-labels.config
config-labels.included		config-labels.included
config-labels.nf		config-labels.nf
config-vars.config		config-vars.config
config-vars.nf		config-vars.nf
copy-no-follow.nf		copy-no-follow.nf
custom-lib.nf		custom-lib.nf
delta.config		delta.config
demo-dsl2.nf		demo-dsl2.nf
demo.nf		demo.nf
dyn-mem.nf		dyn-mem.nf
dynamic-filename.nf		dynamic-filename.nf
dynamic-storedir.nf		dynamic-storedir.nf
each-file-dsl2.nf		each-file-dsl2.nf
each-file.nf		each-file.nf
env-container.nf		env-container.nf
env-out.nf		env-out.nf
env.nf		env.nf
env2.nf		env2.nf
error-finish.nf		error-finish.nf
error-message.nf		error-message.nf
error.nf		error.nf
escape-globs-dsl2.nf		escape-globs-dsl2.nf
escape-globs.nf		escape-globs.nf
exit-if-empty.nf		exit-if-empty.nf
exitstatus-fail.nf		exitstatus-fail.nf
feedback.nf		feedback.nf
file-with-quote.nf		file-with-quote.nf
files.nf		files.nf
glob.nf		glob.nf
hello.nf		hello.nf
input.nf		input.nf
mixing-langs.nf		mixing-langs.nf
modules.nf		modules.nf
multi-into.nf		multi-into.nf
nativeCode.nf		nativeCode.nf
nextflow.config		nextflow.config
omega.config		omega.config
opt-file.nf		opt-file.nf
output-file.nf		output-file.nf
output-globs.nf		output-globs.nf
output-links.nf		output-links.nf
output-val-dsl2.nf		output-val-dsl2.nf
output-val.nf		output-val.nf
print-http-file.nf		print-http-file.nf
profiles.config		profiles.config
profiles.nf		profiles.nf
property-out-vals.nf		property-out-vals.nf
publish-dir.nf		publish-dir.nf
publish-nested.nf		publish-nested.nf
publish-s3.nf		publish-s3.nf
publish-saveas.nf		publish-saveas.nf
race.nf		race.nf
repeaters.nf		repeaters.nf
resume-retried-task.nf		resume-retried-task.nf
retry-ignore.nf		retry-ignore.nf
rnaseq-toy-dsl2.nf		rnaseq-toy-dsl2.nf
rnaseq-toy.nf		rnaseq-toy.nf
s3-files.nf		s3-files.nf
sets.nf		sets.nf
shell-script.nf		shell-script.nf
singleton.nf		singleton.nf
splitLetters.nf		splitLetters.nf
storeCache.nf		storeCache.nf
stress.nf		stress.nf
subdirs.nf		subdirs.nf
subworkflow-dsl2.nf		subworkflow-dsl2.nf
subworkflow-take-dsl2.nf		subworkflow-take-dsl2.nf
tag-resume.config		tag-resume.config
tag-resume.nf		tag-resume.nf

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