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Include aligned sequences and translations in ndjson #1248

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chaoran-chen opened this issue Sep 8, 2023 · 0 comments
Open

Include aligned sequences and translations in ndjson #1248

chaoran-chen opened this issue Sep 8, 2023 · 0 comments
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good first issue Good for newcomers help wanted Extra attention is needed needs triage Mark for review and label assignment t:feat Type: request of a new feature, functionality, enchancement

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@chaoran-chen
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For me, it would be amazing if it would be possible to include the aligned sequences and translations in the NDJSON output.

I call Nextclade as part of a longer pipeline and at the moment, I have to join the individual fasta files together (which is not trivial for huge files).
@chaoran-chen chaoran-chen added good first issue Good for newcomers help wanted Extra attention is needed needs triage Mark for review and label assignment t:feat Type: request of a new feature, functionality, enchancement labels Sep 8, 2023
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good first issue Good for newcomers help wanted Extra attention is needed needs triage Mark for review and label assignment t:feat Type: request of a new feature, functionality, enchancement
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