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Important! Template update for nf-core/tools v2.14.1 #140
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@@ -1 +1,2 @@ | ||
repository_type: pipeline | ||
nf_core_version: "2.14.1" |
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@@ -59,7 +59,4 @@ process { | |
errorStrategy = 'retry' | ||
maxRetries = 2 | ||
} | ||
withName:CUSTOM_DUMPSOFTWAREVERSIONS { | ||
cache = false | ||
} | ||
} |
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@@ -17,7 +17,7 @@ params { | |
// Input data for full size test | ||
// TODO nf-core: Specify the paths to your full test data ( on nf-core/test-datasets or directly in repositories, e.g. SRA) | ||
// TODO nf-core: Give any required params for the test so that command line flags are not needed | ||
input = 'https://raw.githubusercontent.com/nf-core/test-datasets/viralrecon/samplesheet/samplesheet_full_illumina_amplicon.csv' | ||
input = params.pipelines_testdata_base_path + 'viralrecon/samplesheet/samplesheet_full_illumina_amplicon.csv' | ||
There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. Do i need to do this in my tests as well? There was a problem hiding this comment. Choose a reason for hiding this commentThe reason will be displayed to describe this comment to others. Learn more. yes, in all test configs |
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// Genome references | ||
genome = 'R64-1-1' | ||
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@mirpedrol do you know why this is changed by the template update?
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we can continue with our version and not accept the template change :)