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Bump up FASTQ base resources
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To close #378
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jfy133 committed Apr 3, 2020
1 parent 851a9cb commit 2c30c66
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -820,7 +820,7 @@ if (params.run_convertbam) {
* STEP 1a - FastQC
*/
process fastqc {
label 'sc_tiny'
label 'sc_small'
tag "$name"
publishDir "${params.outdir}/FastQC/input_fastq", mode: 'copy',
saveAs: {filename -> filename.indexOf(".zip") > 0 ? "zips/$filename" : "$filename"}
Expand Down Expand Up @@ -980,7 +980,7 @@ if (!params.skip_adapterremoval) {
* STEP 2b - FastQC after clipping/merging (if applied!)
*/
process fastqc_after_clipping {
label 'sc_tiny'
label 'sc_small'
tag "${name}"
publishDir "${params.outdir}/FastQC/after_clipping", mode: 'copy',
saveAs: {filename -> filename.indexOf(".zip") > 0 ? "zips/$filename" : "$filename"}
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