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Bedtools occasionally issues a warning like this when using GRCh38:
***** WARNING: File merged_bams/initial/A14937_libmerged_rg_rmdup.bam has inconsistent naming convention for record:
HLA-A*01:01:01:01 47 100 M_ST-E00180:295:H7JNVCCXY:7:2220:15229:45699 0 +
Bedtools continues running and produces a complete output. However, the error 137 results in the process being identified as "failed" by nextflow. It just requires an exception.
The text was updated successfully, but these errors were encountered:
Bedtools occasionally issues a warning like this when using GRCh38:
Bedtools continues running and produces a complete output. However, the error
137
results in the process being identified as "failed" by nextflow. It just requires an exception.The text was updated successfully, but these errors were encountered: