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Co-authored-by: Christopher Mohr <christopher.mohr@uni-tuebingen.de>
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lkuchenb and christopher-mohr committed Jan 27, 2021
1 parent 414045c commit 5b34aba
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2 changes: 1 addition & 1 deletion .github/workflows/ci.yml
Expand Up @@ -91,7 +91,7 @@ jobs:
nextflow run ${GITHUB_WORKSPACE} -profile ${{ matrix.tests }},docker
nonfree:
name: Run non-free tests
name: Run NetMHC tool family tests
if: ${{ github.event_name != 'push' || (github.event_name == 'push' && github.repository == 'nf-core/epitopeprediction') }}
runs-on: ubuntu-latest
env:
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2 changes: 1 addition & 1 deletion CHANGELOG.md
Expand Up @@ -7,7 +7,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

### `Added`

- [#73](https://github.com/nf-core/epitopeprediction/pull/73) - Add support for the non-free netmhc tool family
- [#73](https://github.com/nf-core/epitopeprediction/pull/73) - Add support for the non-free netmhc tool family including netMHC 4.0, netMHCpan 4.0, netMHCII 2.2, and netMHCIIpan 3.1

## v1.1.0 - Morgenstelle - 2020-10-20

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10 changes: 5 additions & 5 deletions nextflow_schema.json
Expand Up @@ -183,28 +183,28 @@
"external_software":{
"title": "External software",
"type" : "object",
"description" : "External software that is not shipped with the pipeline.",
"description" : "External MHC binding prediction software that is not shipped with the pipeline.",
"default": "",
"properties" : {
"netmhcpan_path" : {
"type" : "string",
"default" : "",
"description" : "To use the 'netmhcpan' tool, specify the original software tarball for NetMHCpan 4.0 (Linux) here."
"description" : "To use the 'netmhcpan' tool, specify the path to the original software tarball for NetMHCpan 4.0 (Linux) here."
},
"netmhc_path" : {
"type" : "string",
"default" : "",
"description" : "To use the 'netmhc' tool, specify the original software tarball for NetMHC 4.0 (Linux) here."
"description" : "To use the 'netmhc' tool, specify the path to the original software tarball for NetMHC 4.0 (Linux) here."
},
"netmhciipan_path" : {
"type" : "string",
"default" : "",
"description" : "To use the 'netmhciipan' tool, specify the original software tarball for NetMHCIIpan 3.1 (Linux) here."
"description" : "To use the 'netmhciipan' tool, specify the path to the original software tarball for NetMHCIIpan 3.1 (Linux) here."
},
"netmhcii_path" : {
"type" : "string",
"default" : "",
"description" : "To use the 'netmhcii' tool, specify the original software tarball for NetMHCII 2.2 (Linux) here."
"description" : "To use the 'netmhcii' tool, specify the path to the original software tarball for NetMHCII 2.2 (Linux) here."
}
}
},
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