Add nf-test to chromap/chromap #10600
maxulyssetest.yml
on: pull_request
Matrix: nf-test
Matrix: nf-core-lint-modules
Matrix: nf-core-lint-modules
Matrix: pytest
confirm-pass
0s
Annotations
28 errors and 2 warnings
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nf-core-lint-modules (chromap/chromap)
Process completed with exit code 1.
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nf-test (modules/nf-core/chromap/chromap, conda)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/chromap/chromap, conda)
The operation was canceled.
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nf-test (modules/nf-core/gatk4/variantfiltration, conda)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/gatk4/variantfiltration, conda)
The operation was canceled.
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nf-test (modules/nf-core/gatk4/variantfiltration, singularity)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/gatk4/variantfiltration, singularity)
The operation was canceled.
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nf-test (modules/nf-core/checkm/lineagewf, singularity)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/checkm/lineagewf, singularity)
The operation was canceled.
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nf-test (modules/nf-core/chromap/chromap, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/chromap/chromap, docker_self_hosted)
The operation was canceled.
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nf-test (modules/nf-core/gatk4/variantfiltration, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/gatk4/variantfiltration, docker_self_hosted)
The operation was canceled.
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nf-test (modules/nf-core/checkm/lineagewf, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/checkm/lineagewf, docker_self_hosted)
The operation was canceled.
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pytest (chromap/chromap, conda)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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pytest (chromap/chromap, conda)
The operation was canceled.
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nf-test (modules/nf-core/checkm/lineagewf, conda)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/checkm/lineagewf, conda)
The operation was canceled.
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nf-test (modules/nf-core/bamtofastq10x, docker_self_hosted)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/bamtofastq10x, docker_self_hosted)
The operation was canceled.
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nf-test (modules/nf-core/bamtofastq10x, conda)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/bamtofastq10x, conda)
The operation was canceled.
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nf-test (modules/nf-core/chromap/chromap, singularity)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/chromap/chromap, singularity)
The operation was canceled.
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nf-test (modules/nf-core/bamtofastq10x, singularity)
Canceling since a higher priority waiting request for 'Run tests-5678' exists
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nf-test (modules/nf-core/bamtofastq10x, singularity)
The operation was canceled.
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confirm-pass
Process completed with exit code 1.
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pytest-changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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pre-commit
The `python-version` input is not set. The version of Python currently in `PATH` will be used.
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